Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1013 ATGACCAAAGCAAGGCGCCTTGGGGTTCGTACTCCCGTGCTTTATGCTGTGGATCCTGTTGTGCACACATTAACATTTGAATATGTTGACGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCTCTTGGTGTCAACGAAGAACGTATGGGCAACATTGCGTCCCAAATTGGTGATGCAATTGGAAAGTTGCATGATGGAGGTCTTGTTCATGATGATTTAACTACATCAAACATGTTATTGAAGAATGATACCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAGGCTGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATGCATTCTTCATGTGGCAATGTGATGGATCAGATACTTGCAGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGGTGA 492 0.4329 MTKARRLGVRTPVLYAVDPVVHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQIGDAIGKLHDGGLVHDDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1013 163 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 163 - -
Lja6g1013 163 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 163 IPR022495 GO:0004674
Lja6g1013 163 Pfam Protein kinase domain 22 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1013 163 SUPERFAMILY Protein kinase-like (PK-like) 8 111 IPR011009 -
Lja6g1013 163 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1013 163 ProSitePatterns Tyrosine protein kinases specific active-site signature. 70 82 IPR008266 GO:0004672|GO:0006468
Lja6g1013 163 Gene3D Transferase(Phosphotransferase) domain 1 45 160 - -
Lja6g1013 163 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 1 157 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1013 Lja-Chr6 23147565 23149157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1013 19 97 MAP Kinase Kinase Gene Family AT1G73500 33.333 1.90e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lja6g1013 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1013 K08851 - egr:104453646 293.508