Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1011 ATGCCTTCTACTACTCTTAAATGGCTAAGCCTTGTGGCCATTATTTGGCTCCAAGCCATAAATGGGACAAACACCGATTTCCCTGCTTACTCTTCCCAGTTGAAGGAGCTTCTTTCTATTTCCCAAGTGCATCTCAATAACCTTTCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCTGGCCTTGCTTCTCTTTACCTACCTCTCTGGCTTGTCCTCGTAATCGTGCAATATCTCTTCATAACAAACCACATTGCCTCTCTATCATATTGGCATGTTTTCTTGCTAACTTTTCTGGCTGGAAATAGCATTTGTTGGATCAACACAGTTTGCTTTGTTGTTGCCATAAGAAACTTTCAATCTGATAGTCAAGTTGCTGTGGGGTTAACAAGCAGTTACCAAGGACTAAGTGCAAAGATTTATACCAATATTGTTGAAGCTGTTTCTCCACACAAAAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCATACCAGTGGTATTTAGCTTAATAGCAGCTCCTTTTGTCAGAGAAATTGAATCCACAAGTTCCAAGAACACAAGTGTTGGGTTTGCTGTTATGTTTGTTATCACAATTGGCACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTCACAAGCAAAACTTCCTCACTTGGAATCCTGATTGGTCTTGTAGTGTCCCTTCTCTTGCTTCTACTAGTCCCAGTTTCTGTGAAGATGAAGGAACTAGCAGGGTCATGTCACAAAAATTGGGAAAGACTTGGAGTCTACTATTTTACTATGGAGGAGGGTACTAATGGAGAGAGGGTGAAAGAGGGTGAACATAGAATAGAAGTTTCAGAGGTTGGTGTTATGGAGGAAATTGGAGTGAAATTAATGCTCAGAAGAGTAAATTTCTGGTTATATTTCTTTGTCTATCTTTTTGGAGCAACAATTGGTTTAGTTTTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGCCACTTCATCTTTGGTGTCTCTATCTTCATCTTTTGGGTTCTTCGGCCGTCTCATACCGTCTCTCATGGATTACTTCTATAGGGGGAAACATAAAATTTCAAGACCTGCCTCAATGGTGGTAGCGATGGCTCCAATATCAATTGCATTCTTCTTACTACTCAACAAAACAGACATTTCTCTATACACCAGCACTGCAGTGATTGGCGTGTGCACTGGAGCAATTACTTCCATAGCTGTTTCCACAACAACTGAGTTATTTGGAACCAAACATTTCTCAGTGAACCATAATGTGGTCGTGGCCAACATCCCCATTGGTTCTTTTCTATTTGGCTACTCAGCTGCACTTCTTTACCATAAGGAAGGGCATGAACATGTGAAATGCCTAGGCATGAAGTGCTACAATCACACTTTTCTCATCTGGGGCTCCGTTAGCTTGCTTGGAACTGTCTTGGCTTTGATTCTTCATGCGAGGACTCGCAAATTTTATTCACAGAAATAA 1503 0.4098 MPSTTLKWLSLVAIIWLQAINGTNTDFPAYSSQLKELLSISQVHLNNLSFASDAGKLFGWFSGLASLYLPLWLVLVIVQYLFITNHIASLSYWHVFLLTFLAGNSICWINTVCFVVAIRNFQSDSQVAVGLTSSYQGLSAKIYTNIVEAVSPHKKARTFLFLNSLIPVVFSLIAAPFVREIESTSSKNTSVGFAVMFVITIGTGIYAVMSSLQFVTSKTSSLGILIGLVVSLLLLLLVPVSVKMKELAGSCHKNWERLGVYYFTMEEGTNGERVKEGEHRIEVSEVGVMEEIGVKLMLRRVNFWLYFFVYLFGATIGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLIPSLMDYFYRGKHKISRPASMVVAMAPISIAFFLLLNKTDISLYTSTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPIGSFLFGYSAALLYHKEGHEHVKCLGMKCYNHTFLIWGSVSLLGTVLALILHARTRKFYSQK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1011 500 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 500 - -
Lja6g1011 500 SUPERFAMILY MFS general substrate transporter 7 495 IPR036259 -
Lja6g1011 500 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 500 - -
Lja6g1011 500 Pfam Nodulin-like 7 242 IPR010658 -
Lja6g1011 500 Gene3D MFS general substrate transporter like domains 222 494 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1011 Lja-Chr6 23128617 23130529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1011 1 500 Nodulin-like Gene Family AT2G30300 47.059 1.04e-144 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1011 - - gmx:100800763 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1011 6 23128617 23130529 Lja6g1011 6 23128617 23130529 ECH