Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1007 ATGGCGCCAGCTCAGAAACCACTTCTGAAGCTTGAAGAGAAAGATGTTGTACTCATCAAACCATCAAAATCAACTCCTTCCTCTGTTCTTCCTCTGTCCACTCTTGACAATAGACCTGATGCTTTGATTTATTACTACCCTCTTGCAGGGAGGCTAGTAAGACATGCTGATGGAAAACTCAGAGTCCTTTGCGATGAAGAAGAATATGGTGTTCCATTCATAGAGGCAGTTGCTAGCTGCAGCCTTTCTTCTGTTGATTACTTGGATGGTGCTGACACTGAATTTGCAAGACACTTGGTGTTTGATCTTCCTACTGAGGATGAACAAGGTTACCAATACCCATTGGTGATCAAGTTGACCAAATTTCTTTGTGGAGGTTTCACAATTGGATTGGGAATGTCACATAGTGTTGTTGACGGCATCGGAGGATTTCAATTCTTCCGCGCGGTTGTTGAACTCGCGAGCGGAAGAAGCGAGCCCTCCGTGAAGCCTGTGTGGGAGAGACACAGACTGGTGGGATTAAAATCAATCACAGATGAAGAAACATTGACACGGCAACCCATGGATAACGCATCTTCGGCGGTTTCACCGTTTCTGCCAAAAGATGAACTCATTCAAGTCTGTTTTAAGGTGAGCGGCGAGACCTTAAAAAGACTCAAGTGGAGTTTGGAAAAGGAAAGTAATGATGGGAGTATCGCGACGAGTTTCGAATCACTTGGAGCCTACGTGTGGAGGTCGAGAACGAGAGCTTTGGAACAAAACAACGACGGTAAAACGCAGTTTTCTTTCCTTGTGGGAGCAAGAAAGCACTTGTTGCATGAGTCTCCTTTACTAGAAGGGTACTACGGGAACGCGATTGTGGATGCGTACGTAGTACTGACAGTAAAGGAGCTCAACAAACTGTCGCTCTCTGATATTGTGAAACGTATCAAAGAAGCTAAAAAAGCTGCTTTTGCTGCGGATTATGTTAAAAACTTTATGAACACTAAGGAGTCCAATCCAGTAGTGGATTTTACCCTGTATGGTAACGGTGCAATCATATTTCTAACTGAGTGGAAGCATGTGGGTTTCTCACAAGATGTAGATTTTGGAGGGAATGAAGCTGTGAATATGGTACCTGCCCCTAGCGGCTTGTTTGGCGGTCCGCCTTCGTGCATCTTTGCGCCTCCTAACAAATTGGATGATCCGTCAATGAAAGGAGGAGTTAGAATTTTCACCACGCTCCCAGTTGATGCTGTGGCAAAGTTCAGGAAGGAAATGGAAGCCATGAATGCGATCTGA 1281 0.4496 MAPAQKPLLKLEEKDVVLIKPSKSTPSSVLPLSTLDNRPDALIYYYPLAGRLVRHADGKLRVLCDEEEYGVPFIEAVASCSLSSVDYLDGADTEFARHLVFDLPTEDEQGYQYPLVIKLTKFLCGGFTIGLGMSHSVVDGIGGFQFFRAVVELASGRSEPSVKPVWERHRLVGLKSITDEETLTRQPMDNASSAVSPFLPKDELIQVCFKVSGETLKRLKWSLEKESNDGSIATSFESLGAYVWRSRTRALEQNNDGKTQFSFLVGARKHLLHESPLLEGYYGNAIVDAYVVLTVKELNKLSLSDIVKRIKEAKKAAFAADYVKNFMNTKESNPVVDFTLYGNGAIIFLTEWKHVGFSQDVDFGGNEAVNMVPAPSGLFGGPPSCIFAPPNKLDDPSMKGGVRIFTTLPVDAVAKFRKEMEAMNAI* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1007 426 Gene3D - 199 420 IPR023213 -
Lja6g1007 426 PANTHER ACYL TRANSFERASE 4 41 423 - -
Lja6g1007 426 Gene3D - 9 179 IPR023213 -
Lja6g1007 426 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 39 - -
Lja6g1007 426 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 41 423 - -
Lja6g1007 426 PANTHER ACYL TRANSFERASE 4 7 39 - -
Lja6g1007 426 Pfam Transferase family 41 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1007 Lja-Chr6 22728908 22730286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1007 5 374 Monolignol Biosynthesis Gene Families AT5G48930 25.815 5.88e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1007 K20240 - gmx:100783730 408.683