Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1005 ATGGTCTCCAGGGGTCACAAGAGAACAGCCATGTACAGGAACCTACAACTTCTTCGTTCAATCTCATGCTCTCATTCGCGGCGCCGTAAAGCCTCAGTTTTATTGGATGTATCAGAGTATATACAAGGTTTAAAGCAAAAGCTGCAAGAATTGAACCAGTTACAAGTTGCAAAAGCTCAGAAAATCATTGATTATGATCCAATGCCTAAGCTTAAAGTTGAACCACAAGAAGAAGGCTTTGTGATTAAGGTGCTGAGTGAAAGGAGTTGTCAAGGGTTGCTGGTGTTCATATTAGAAGCCTTTGAAGAGCTGGGTCTTGATGTGCTCCATGCTCGGGTTTCTTGTGCAGACATCTTCTCTCTAGAAGCTGTTGGAAACAAAGTAATGAATGATGTGACATACACACTCACATGCATAATTATCAATTAA 429 0.4103 MVSRGHKRTAMYRNLQLLRSISCSHSRRRKASVLLDVSEYIQGLKQKLQELNQLQVAKAQKIIDYDPMPKLKVEPQEEGFVIKVLSERSCQGLLVFILEAFEELGLDVLHARVSCADIFSLEAVGNKVMNDVTYTLTCIIIN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1005 142 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 130 - -
Lja6g1005 142 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 130 - -
Lja6g1005 142 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1005 Lja-Chr6 22577725 22579158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1005 - - gmx:100527278 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1005 6 22577725 22579158 Lja6g1005 6 22577725 22579158 ECH
Lja6g1005 6 22577725 22579158 Lja1g3290 1 40820768 40821867 ECH
Lja1g3290 1 40820768 40821867 Lja6g1005 6 22577725 22579158 ECH
Lja3g3405 3 67133749 67135694 Lja6g1005 6 22577725 22579158 ECH