Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1001 ATGGCTTCTCATATTGTTCACTACTGTTTACTTATGCTTCTTGCCATGTTAACAATCTCTTCCCATGCTACAACACTTTCTCCTAACTTTTACAATCAAGCACTGCCCATCGTTAAGTCAATTGTTCAGCGAGCAATTTTACGTGAGCGACGCATGGGAGCTTCTTTACTTCGTTTGTTCTTTCATGACTGTTTTGTCAATGGATGTGATGGATCAGTTCTGCTGGATGATACCCCAAACTTAATAGGCGAAAAGACAGCCCTACCAAATATTGGTTCAATTAGAGGTTTTGATGTGGTTGATCAAATTAAAGCAGCAGTTGATAGAGCTTGCAAAAGCCCCGTGGTGTCATGTGCAGATATCTTAGCAATAGCTGCTCGTGATTCTGTAGCCATTCTAGGAGGTCAACTCTATTGGTACAAAGTGTTACTAGGAAGAAGAGATGCAAGAACTGCAAGCAAGGATGCCGTAGTCTCCAATCTTCCTGCTCCATTTTCCAGTTTCTCTGAGCTTCTTTCCAAATTTCAGTCTCATGGGCTGGACCTTAAGGATCTCGTAGCTCTCTCGGGTGCCCACACCATTGGATTTGCAAAGTGCACTACCTTTAGGGACAGGATCTACAACGACACCAACATAGACCGCAAGTTTGCATCTTCTTTGAAAGGGACATGCCCTAGAACTGGTGGATTTAACAACTTGGCAGCACTAGATCGCGCCACTCCCATAACATTTGATACTTCTTACTACACGGCTTTGCTTCGTAAAAGGGGTCTCCTTCATTCTGATCAAGAGCTTTACAAGGGAGATGGTAGTGAAAGTGACAAGTTGGTGCAGCAATACAGCAGGAACTCGTTTTACTTCGCTGCACATTTTAAAGCTTCCATGATCAAGATGGGTAACATGAAGCCGAAGCCTCTTACCGGAAACGCAGGAGAGATCAGGACCAACTGTAGAAAAGTCAACGGATAA 969 0.4365 MASHIVHYCLLMLLAMLTISSHATTLSPNFYNQALPIVKSIVQRAILRERRMGASLLRLFFHDCFVNGCDGSVLLDDTPNLIGEKTALPNIGSIRGFDVVDQIKAAVDRACKSPVVSCADILAIAARDSVAILGGQLYWYKVLLGRRDARTASKDAVVSNLPAPFSSFSELLSKFQSHGLDLKDLVALSGAHTIGFAKCTTFRDRIYNDTNIDRKFASSLKGTCPRTGGFNNLAALDRATPITFDTSYYTALLRKRGLLHSDQELYKGDGSESDKLVQQYSRNSFYFAAHFKASMIKMGNMKPKPLTGNAGEIRTNCRKVNG* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1001 322 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PANTHER PEROXIDASE 72-RELATED 7 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 Gene3D - 33 318 - -
Lja6g1001 322 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Lja6g1001 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lja6g1001 322 Pfam Peroxidase 38 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1001 322 PANTHER CATIONIC PEROXIDASE 7 321 - -
Lja6g1001 322 Gene3D Peroxidase, domain 2 162 298 - -
Lja6g1001 322 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1001 Lja-Chr6 22503736 22510110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1001 26 321 Peroxidase AT5G05340 55.629 3.02e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1001 K00430 - gmx:100816580 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1001 6 22503736 22510110 Lja6g1001 6 22503736 22510110 ECH