Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1000 ATGGCTTCTCTTCTCCAATCAATGCTTGTGCTAGTTATGGTCACTTTGGCCACCTTTTCCCATGCAATGCTCACTAGTGATTTCTACAAGAATGTTTGCCCAGAGGCACTGCCAGTCATACGATTAGTCGTTGAAAAAGCAATTGCTCGTGAGCGGCGTGATGGAGCATCCTTGCTGCGTATGCATTTCCACGACTGTTTTGTTAATGGTTGTGATGGATCAGTTTTGCTGGATGACACCCAGAACTTTATTGGTGAAAAAACAGCCCTGCCAAATAATCATTCATTAAGAGCATTTGACGTTGTTGATGACATTAAAGCTGCGGTTGACAAAGCTTGCAAACGTTCCGTCGTATCATGCGCTGATATTTTAGCTGTTGCTGCTCGTGATTCTATAGCCATATTGGGGGGTCCACACCTTTGGTATAATGTATCATTGGGCAGAAGAGATGCAAGAACTGCAAGCAGGGATGCAGCAAACACCAATATCCCTGCCCCACTTTTCAGTTTCTCACAACTTGTTTCAAATTTTAACTCTCATGGATTGGACCTCAAAGACCTAGTGGCACTCTCCGGTGGCCACACCATTGGCTTTGCCAGGTGCACCACCTTCCGGAACCGGATCTACAATGAAAACAACATAGAGAAAAAATTTGCAGCCTCTTTGAAAAAGAAGTGCCCTGGAAATGGCGGAGACAACAATTTGACACCGTTGGATTCAACTCCTGCAAGGGTTGACACAATGTATTACAAGGAATTGATGTGCAAAAAGGGTCTCCTGCATTCTGATCAAGAGTTGTTCAAAGAAAATGGTAGTGAAAGTGACAAGTTGGTGGAGCTATACAGTACAAACCCGTTTGCTTTTGCTGAAGATTTCAAAGCTTCTATGATCAAGATGAGTAACCTAAAACCTCTTACTGGAAGTCAAGGAGAGGTAAGGTTCAATTGCAGAAAAATTAATTAA 963 0.4299 MASLLQSMLVLVMVTLATFSHAMLTSDFYKNVCPEALPVIRLVVEKAIARERRDGASLLRMHFHDCFVNGCDGSVLLDDTQNFIGEKTALPNNHSLRAFDVVDDIKAAVDKACKRSVVSCADILAVAARDSIAILGGPHLWYNVSLGRRDARTASRDAANTNIPAPLFSFSQLVSNFNSHGLDLKDLVALSGGHTIGFARCTTFRNRIYNENNIEKKFAASLKKKCPGNGGDNNLTPLDSTPARVDTMYYKELMCKKGLLHSDQELFKENGSESDKLVELYSTNPFAFAEDFKASMIKMSNLKPLTGSQGEVRFNCRKIN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1000 320 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Lja6g1000 320 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Lja6g1000 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Lja6g1000 320 PANTHER CATIONIC PEROXIDASE 5 319 - -
Lja6g1000 320 Gene3D Peroxidase, domain 2 164 299 - -
Lja6g1000 320 Gene3D - 27 317 - -
Lja6g1000 320 PANTHER PEROXIDASE 72-RELATED 5 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g1000 320 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1000 Lja-Chr6 22458857 22464038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1000 21 320 Peroxidase AT5G05340 56.766 3.44e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1000 K00430 - gmx:100816056 494.582