Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0999 ATGGCACAATCTCCTTCTCATTCTGCTTCTTTCTCTCCATCATCATCAATTATTGTTGCAGTTGCTGTGTTTTTTCTTTTAACAGGGTCCTCTTCTTCAGCTCAACTCTCTGAGAGCTTCTATTCTAAGAAATGTCCTAAGCTTTTTGCAGCTGTGGAACCTGTTGTTAAGGTTGCTGTCGCCAAAGAGCGTCGCATAGGAGCATCTATCCTTCGCCTCTTCTTCCATGACTGCTTTGTGGATGGTTGTGATGGGTCATTACTGCTTGATGACACTTCAACCTTCAGAGGAGAAAAAACTGCAGCTCCAAACAACAATTCAGTGAGAGGTTTTGAAGTAATTGACGCTATCAAGTCTAAGGTGGAGAAATTATGCCCTGGTGTTGTGTCCTGTGCTGATATCTTGGCCATTGCTGCTCGTGACTCTGTTGTCCTTCTTGGAGGACCTTCTTGGAAGGTAAAACTTGGAAGAAGGGATTCTAGGACAGCCAACTTCACTGCTGCAAACACTGGTGTGATTCCAGCTCCCACTTCTAACCTCACCAACCTTATCTCAACTTTTCAAGCTCAAGGGCTTTCTGCCAAAGACATGGTTGCTTTATCTGGAGGTCACACAATAGGGAGATCAAGGTGTACCAGTTTCAGAAACCACATATACAATGAAAGCAACATTGACAGTACATTTGCTAAGGCCAAGCAGAGGAACTGTCCCAAAGCTTCTGGCTCTGGAGACAACAACCTTGCTGTTCTTGACGTGAGAACTCCTAATCACTTTGACAACAACTACTTCAAGAACCTCATCATCAAAAGGGGACTCCTACACTCTGATCAAGAACTCTTCAATGGTGGCTCCACTAATTCACTGGTTAGAGCTTACAGCAAGAATGGTAAGGCCTTCCGTTCTGACTTTGTTACTGCAATGATTAAGATGGGAAACAACAAGCCCTTAACTGGATCAAAAGGGGAGATTAGGAAGAACTGCAGGAGACTCAATTAG 996 0.4398 MAQSPSHSASFSPSSSIIVAVAVFFLLTGSSSSAQLSESFYSKKCPKLFAAVEPVVKVAVAKERRIGASILRLFFHDCFVDGCDGSLLLDDTSTFRGEKTAAPNNNSVRGFEVIDAIKSKVEKLCPGVVSCADILAIAARDSVVLLGGPSWKVKLGRRDSRTANFTAANTGVIPAPTSNLTNLISTFQAQGLSAKDMVALSGGHTIGRSRCTSFRNHIYNESNIDSTFAKAKQRNCPKASGSGDNNLAVLDVRTPNHFDNNYFKNLIIKRGLLHSDQELFNGGSTNSLVRAYSKNGKAFRSDFVTAMIKMGNNKPLTGSKGEIRKNCRRLN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0999 331 CDD secretory_peroxidase 40 329 IPR033905 GO:0004601|GO:0042744
Lja6g0999 331 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Lja6g0999 331 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 PANTHER PEROXIDASE 72-RELATED 16 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Lja6g0999 331 SUPERFAMILY Heme-dependent peroxidases 35 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 Gene3D Peroxidase, domain 2 174 310 - -
Lja6g0999 331 PANTHER PEROXIDASE 16 329 - -
Lja6g0999 331 Pfam Peroxidase 55 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja6g0999 331 Gene3D - 40 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0999 Lja-Chr6 22414238 22417553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0999 21 331 Peroxidase AT5G58400 65.595 9.84e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0999 K00430 - gmx:100813384 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0999 6 22414238 22417553 Lja6g0999 6 22414238 22417553 ECH
Lja1g3287 1 40792555 40795628 Lja6g0999 6 22414238 22417553 ECH