Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0983 ATGGGTAACAAGTTCAAATTATCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAGAGACATGAGCAGATCAAGGAAGAGAAATAGCTCTAAGGGCATGAAGAAGAACAAAGTGACCTCACCAACAACATCCACATCAACATCCCAAATAGCTGGTAAGTTATACTTATACAACTCTCCTATTCACTCCAAACAGTCAGAAATCCCATTCACTGATTCACCAAGAAGGTCATCCAAGAGAAGATCAAGGAGAAAAGCCATCTATAAGCCTTCTCCTAAAGTTATTTCCCCCATAGAGAGTTCTTCTGAATCAAATCTCCATGAATATGCTACATCTGATTCTGAGAGTGATAAGTTTACTGTTCCTGATCACTTTCCTAATGGGCTAGCCTCTGATTGCAGTTGTAGAATTAGCTCTTCCACAAATGACATCATCATTGACATGAAAAATGAATCCTTCACTGAAAAACTTGATGAATTTGATACTATTTCACAGCTAGGTCTTGCCCCAATATTTACAAAGCCAGTGAAGTTTAATGATGATTATAAGGTCATTGAATCTACTCATGAGTTCATACGATCAACCAAATTGGATGAGTTGAAGACTCATCAATTGAAAGAGAAAAACAGAAGAACTAAGAGGGAGAGAAAAACCAGTCCAATTTCTAGAGTGTCCTCTGCTAATTCCACAGGCATAAGGCTCAGAGTAAATTCTCCAAAACTTGCAAACAAGAAAGTTCAAGGCTATGCAAGAAAGAGTGTGTCATGCAAAGACTCATCACTAAGTGCAGATTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCATTTGATCCACAAAGAGACTTCAAGGAATCAATGGTGGAGATGATTATGGAGAACAATATCAGGGAATCAAAAGATCTGGAGAACCTGCTGGCATGCTATCTTTCACTGAATTCAGGTGAATACCATGAGCTCATTGTCAAAGCATTTGAGCAAATATGGTATGACATGGCTCAACTTAAAATGTAA 1014 0.3817 MGNKFKLSDMMPNAWFYKLRDMSRSRKRNSSKGMKKNKVTSPTTSTSTSQIAGKLYLYNSPIHSKQSEIPFTDSPRRSSKRRSRRKAIYKPSPKVISPIESSSESNLHEYATSDSESDKFTVPDHFPNGLASDCSCRISSSTNDIIIDMKNESFTEKLDEFDTISQLGLAPIFTKPVKFNDDYKVIESTHEFIRSTKLDELKTHQLKEKNRRTKRERKTSPISRVSSANSTGIRLRVNSPKLANKKVQGYARKSVSCKDSSLSADFPEGFAVVKSSFDPQRDFKESMVEMIMENNIRESKDLENLLACYLSLNSGEYHELIVKAFEQIWYDMAQLKM* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0983 337 MobiDBLite consensus disorder prediction 66 119 - -
Lja6g0983 337 MobiDBLite consensus disorder prediction 23 47 - -
Lja6g0983 337 Pfam Transcriptional repressor, ovate 276 332 IPR006458 -
Lja6g0983 337 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 270 332 IPR006458 -
Lja6g0983 337 MobiDBLite consensus disorder prediction 96 110 - -
Lja6g0983 337 ProSiteProfiles OVATE domain profile. 272 331 IPR006458 -
Lja6g0983 337 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 335 IPR038933 GO:0045892
Lja6g0983 337 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 335 - -
Lja6g0983 337 Pfam DNA-binding domain 1 38 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0983 Lja-Chr6 21893605 21894652 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja6g0983 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0983 - - gmx:100798120 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0983 6 21893605 21894652 Lja6g0983 6 21893605 21894652 ECH