Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0966 ATGGATCCAGACGCGTTAGCAAAGGCATTCGTGGAGCACTATTACTCAACCTTCGATTCCAACCGTGCTGCTCTTGCTAATCTCTATCAGGAAGGTTCCATGCTCTCTTTCGAAGGTCAAAAGATTCAAGGTTCTTCAAACATCGTCGCTAAACTCACCTCTCTCCCTTTCCAACAGTGTCATCATTCCATCACCACCGTCGATTGCCAACCCTCCGGCGCCACCTCCGCCATGCTCGTCTTCGTCAGCGGTAACCTCCAACTCGCCGGTGAACAACACGCCCTCAACTTCAGCCAGATGTTCCATTTGATGCCAACACAGCAGGGAAGCTATTATGTGTTGAATGACATATTCCGTTTGAACTATGCATGA 372 0.4919 MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQCHHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0966 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Lja6g0966 123 Gene3D - 1 123 - -
Lja6g0966 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Lja6g0966 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Lja6g0966 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Lja6g0966 123 CDD NTF2 2 122 IPR018222 -
Lja6g0966 123 PANTHER NUCLEAR TRANSPORT FACTOR 2-LIKE 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0966 Lja-Chr6 21485631 21487852 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0966 - - gmx:100777334 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0966 6 21485631 21487852 Lja4g1037 4 8843203 8845600 PCT