Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0938 ATGTATTTATCAGAAAAACCTCGTCCCATTGATTTCTACAAACAGGAAGGGACACGAGACATGATGATAGAGGTGGTATCCAACGCTGAACTTCCACCGCCGCAACACCACCAGCCACCGCCGATGATCCTCGGTGAGAGCAGCGGCGAGGACCCGGAACTGGAGATCAAGGCTCCGAAGAAGCGCGCTGAGACATGGATTCAAGACGAGACGAGAAGCCTTATTGGGCTTCGTCGCGAGATGGATGCGCTTTTCAACACTTCGAAATCGAACAAGCATTTGTGGGAACAGATTTCGGCGAAGATGAGGGAAAAGGGTTTCGATCGGTCACCCACCATGTGTACTGATAAGTGGAGGAACCTGTTGAAGGAGTTCAAGAAGGCTAAGCACCATGATAGAGGTGGGAGTGGCTCTGCTAAGATGTCTTATTACAAAGAGATTGATGAGATCCTGAGAGAGAGGAGCAAGTGTGTGCAGTATAAGAGCCATACTCCTCCTTCCAAAGTTGACTCCTTTATGCAGTTTGCTGATAAAGGTATTGATGATACCAGCATTTCTTTTGGGCCAGTTGAAGCTGCTGGAAGACCAACACTCAATCTTGAGAGAAGTTTAGATCATGATGGACATCCTCTTGCCATTACCGCAGCTGAGGCTGTTGTGGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACAGAAACTCCTGGAAATGGTGGTGAAAGTCAGTCATGTGGAAGGGTTATTTCAGTCAAGTGGTGTGATTATACGAGACGAATAGGTATTGACGGCACCCCAGAAGCCATCAAGGAGGCAATTAGGGCTGCTTTTCGGTTGAGAACTAGACGTGCATTCTGGTTAGAGGATGAGGACCAGATTATCAGAAGTATTGATCGTGACATGCCTATAGGCAATTACACTCTTCACCTTGATGAAGGAATGGCTATTAAAGTATGCCTTTACGATGAGCCTGACCATATTGCTGTGCATACTGAAGAGAAGATATTTTACACCGAAGATGATTACCGCGATTTTCTGACGCGTCGTGGCTGGACTTGTCTAAGAGAATTTGACGGCTATAGAAACATTGACAATATGGATGATCTTCGACCTGGTGCCATATATCGTGGGGTGAGTTGA 1137 0.467 MYLSEKPRPIDFYKQEGTRDMMIEVVSNAELPPPQHHQPPPMILGESSGEDPELEIKAPKKRAETWIQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGSGSAKMSYYKEIDEILRERSKCVQYKSHTPPSKVDSFMQFADKGIDDTSISFGPVEAAGRPTLNLERSLDHDGHPLAITAAEAVVASGVPPWNWRETETPGNGGESQSCGRVISVKWCDYTRRIGIDGTPEAIKEAIRAAFRLRTRRAFWLEDEDQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDEPDHIAVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0938 378 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 377 - -
Lja6g0938 378 CDD GT1 64 129 - -
Lja6g0938 378 Pfam Myb/SANT-like DNA-binding domain 65 150 IPR044822 -
Lja6g0938 378 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Lja6g0938 378 PANTHER - 5 377 - -
Lja6g0938 378 Gene3D - 66 128 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0938 20 377 Trihelix Transcription Factor Family AT3G25990 70.924 2.53e-179 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lja6g0938 Myb_DNA-bind_4 1.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0938 - - ccaj:109807736 694.115