Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0929 ATGAGAGAGGCCAATAGAAATAGTAATGTGGGAAAATTCGTTCGCCGTATTGAAATGATAGCTAATATGGTTACATTACAAGGAGAAGACCAACCTTGTATTCGTAATGTGATGACCCTTAAGTCATGTTCTCCTATTGTTGGTGTTGACGTCATGACATTTGATACAGAAAGAGAAGTCCTGTTAGCTTGGAGGGATTTTATTCGTGAAGTGGATCCTGATATTATTATTGGATATAACATATACAGTTTTGACATGCCATATCTTATTGAGAGAGCTGACACATTGAAAATAACAGAACTTCCAATTCTAGGCCGTATCAGGAACAATATAGTTCGAGTAAAGGATTCAACTTCCTCATCAAGGCAGTTAGGAACCAGGGAAAGTAAAGAAGTTACAGTTGAAGGGAGAGTGCAGTTCGATTTGCTCCAGGTTATGCAAAGAGACTACAAATTAAGTTCTTATTCATTGAATTCTAACTCGGCTCACTTCCTTTCTGAGCAGAAAGAGGATGTTCATCATTCAATTATATCTGATCTTCAAAATGGAAATGCAGAAACTAGGAGGTGCCTCGCAGTGTATTGTTTGAAGGTTTAG 597 0.3769 MREANRNSNVGKFVRRIEMIANMVTLQGEDQPCIRNVMTLKSCSPIVGVDVMTFDTEREVLLAWRDFIREVDPDIIIGYNIYSFDMPYLIERADTLKITELPILGRIRNNIVRVKDSTSSSRQLGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSNSAHFLSEQKEDVHHSIISDLQNGNAETRRCLAVYCLKV* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0929 198 SUPERFAMILY Ribonuclease H-like 9 197 IPR012337 -
Lja6g0929 198 Gene3D - 4 198 IPR036397 GO:0003676
Lja6g0929 198 Pfam DNA polymerase family B, exonuclease domain 15 159 IPR006133 -
Lja6g0929 198 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 16 197 - -
Lja6g0929 198 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 16 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0929 Lja-Chr6 20458711 20461217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0929 20 197 Core DNA Replication Machinery Family AT5G63960 72.821 1.96e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0929 K02327 - qsu:112011411 299.671