Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0928 ATGGGTTCATTTTCTCTCTTTCTTGTGGTTGTACTTTCTTTGTTCACTTCCTATGCTGTTTGCCAATTTGAAGAGTTTATCAGCATTGATTGTGGAGGAACTAGTAACTACACTGATCCAAGCACAGGGCTTGCATGGATTTCAGACTCTGGTTTCATGGAAAATGGAAAATCTGTGGAAGTTGAAAACCCTAATGGGAACAAGGTTCAGTATCAGAAACGCAGAGACTTTCCTATAGACAGCAGGAAACACTGTTACACGCTGAACACTGAGGAGAGAAGAAGGTACCTTGTGAGAGCAACATTTCAGTATGGAAGCTTGGAAAATGGAGACACATACCCGCAGTTTCAGCTCTACTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGAAGCCTCAAGAATTTATGTGAAGGAAATGATCTTCAGGGCACCCTCTGATTCTATTGATGTTTGCTTATGCTGTGCTACAACTGGTTCTCCCTTCATGTCTACCCTTGAGCTTCGACCGTTGAATCTTTCTATGTATGCCACGGATTTTGAGGACAATTTCTTCTTGAAAGTAGCTGCTAGGATTAACTTTGGTGCTCCAAGCGAGGATGCAGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGATTCTGATCTTATTAGAAGACAAAATTATCTTGTTGGGGTGGCTACAGGCACAGAAAGAATTAACACAACCAATAACATACAAGTAGGGACAAGAGAATACCCACCTGTTAAAGTGATGCAAACCGCGGTTGTTGGCACAGAAGGAGTACTTAGTTATAGACTAAACCTTGAAGACTTCCCTGGCGATGCTAGAGCTTATGCATATTTTGCGGAAATTGAAAATCTGGGTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTTTATAGCTGACTATAGCAATGCAGTAGTGAATATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAGCCAAGTTACATGAATGTGAGTCTGCAATTTGTTCTCTCATTCTCCTTTCGTAGGACCCGGGATTCTTCTCGAGGACCTCTTCTAAATGCATTGGAAATTAGCAAATACGTACAAATCGCTCCAAAGACCGACAGGCAAGATTCAAATGTTGTTAATGCAATTGGCTCCTTGTCTTCTGACATTGTCCTGGAGAGAAAAGGGGATCCATGTGTTCCAACTCCCTGGGAGTGGGTAAACTGTAGTACCAATACACCTCCAAGAATTACCAAGATAAACCTATCAAGAAGGAATGTGAAGGGTGAAATCCCGAATGAGCTCAAAAACATGGAAGCATTGACAGAATTGTGGTTAGATGGCAACTTGCTTACAGGACAACTACCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAATAAATTGACTGGTCCACTACCATCTTACTTGGGTAGTTTGCCGAGTTTACAAGCACTGTTCATACAGAATAACTCATTTAATGGGGAAATTCCAGCAGGATTATTATCTGCAAAAATCATTTTCAACTATGATAATAATCCTGGACTACATAGAGGGAACAAAAAGCATTTTAAGTTGATGCTAGCAATTTCTATTGGAGTGCTAGTGATTCTATTAATACTATTCTTAGCAAGTTTAGTGCTCTTGTGTAATCTGCGGAGAAAGACATCTCAACAGAAACGTGATGAAAATGGGATTTCAGGATCTAAACCTTTAACTGGATCTTCATTTCTGCGAGGTGGGAGTTTAATGGATGAAGGTACTGCATACTATATTGCGCTCTCAGAATTGAAAGAAGCTACTAATGATTTTTCGAAGAAGATTGGCAAAGGAAGCTTTGGATCTGTTTATTATGGGAAAATGAGAGATGGAAAAGAGATAGCAGTTAAGACTATGACTGATCCGTCCAGCCATGGGAACCAGCAATTTGTGAATGAGGTAGCCCTCCTATCAAGAATTCATCACCGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAATGGCACTTTACGGGACCACATTCATGATTGTTCGACTGAGATGAAATTAGACTGGTTAGCTCGGCTTCGAATTGCAGAAGATGCAGCTAAAGGCCTTGAATACTTGCACACAGGATGCAATCCTAGTATCATTCACCGAGATGTAAAGACGAGCAATATTCTCCTGGACATCAATATGAGAGCAAAGGTGTCAGATTTTGGACTCTCAAGACTAGCTGAAGAAGATTTAACTCATATATCAAGTGTTGCGAGGGGAACTGTAGGCTACCTGGATCCTGAGTACTATGCAAATCAGCAATTGACTGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTTCTGGAACTGATATCTGGAAGAAAGCCTGTATCCATTGAAGATTATGGTCCTGAAATGAATATTGTTCACTGGGCAAGATCTTTAATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTAGTTTCCCATGTAAAAACAGAGTCAATTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAGGATGCTTCTAAGATTGAAAAAGGGACAGAAAATCAGCTCAAATTATCATCTTCAGGCAGTTCAAAACCCCAATCTTCAAGGAAAACTTTACTTACAAGCTTTCTTGAGATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCATCAGCTAGATAA 2784 0.4034 MGSFSLFLVVVLSLFTSYAVCQFEEFISIDCGGTSNYTDPSTGLAWISDSGFMENGKSVEVENPNGNKVQYQKRRDFPIDSRKHCYTLNTEERRRYLVRATFQYGSLENGDTYPQFQLYLDATKWATVSIYEASRIYVKEMIFRAPSDSIDVCLCCATTGSPFMSTLELRPLNLSMYATDFEDNFFLKVAARINFGAPSEDAVRYPDDPYDRIWDSDLIRRQNYLVGVATGTERINTTNNIQVGTREYPPVKVMQTAVVGTEGVLSYRLNLEDFPGDARAYAYFAEIENLGKNETRKFKLEQPFIADYSNAVVNIAENANGSYTLYEPSYMNVSLQFVLSFSFRRTRDSSRGPLLNALEISKYVQIAPKTDRQDSNVVNAIGSLSSDIVLERKGDPCVPTPWEWVNCSTNTPPRITKINLSRRNVKGEIPNELKNMEALTELWLDGNLLTGQLPDMSNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFNGEIPAGLLSAKIIFNYDNNPGLHRGNKKHFKLMLAISIGVLVILLILFLASLVLLCNLRRKTSQQKRDENGISGSKPLTGSSFLRGGSLMDEGTAYYIALSELKEATNDFSKKIGKGSFGSVYYGKMRDGKEIAVKTMTDPSSHGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHDCSTEMKLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVSIEDYGPEMNIVHWARSLIRKGDVISIMDPSLVSHVKTESIWRVAEIAMQCVEQHGASRPRMQEVILAIQDASKIEKGTENQLKLSSSGSSKPQSSRKTLLTSFLEIESPDLSNSCLPSAR* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0928 927 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Lja6g0928 927 PANTHER - 16 890 - -
Lja6g0928 927 Pfam Malectin-like domain 29 362 IPR024788 -
Lja6g0928 927 SMART serkin_6 605 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0928 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Lja6g0928 927 SUPERFAMILY L domain-like 398 506 - -
Lja6g0928 927 CDD STKc_IRAK 611 872 - -
Lja6g0928 927 Gene3D Phosphorylase Kinase; domain 1 583 680 - -
Lja6g0928 927 Gene3D Transferase(Phosphotransferase) domain 1 681 898 - -
Lja6g0928 927 Pfam Protein tyrosine and serine/threonine kinase 607 872 IPR001245 GO:0004672|GO:0006468
Lja6g0928 927 PANTHER OS07G0107800 PROTEIN-RELATED 16 890 - -
Lja6g0928 927 ProSiteProfiles Protein kinase domain profile. 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0928 927 Gene3D Ribonuclease Inhibitor 372 521 IPR032675 -
Lja6g0928 927 SUPERFAMILY Protein kinase-like (PK-like) 592 872 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0928 Lja-Chr6 20417595 20424023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0928 1 927 Receptor kinase-like Gene Family AT1G67720 68.925 0.0 1296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja6g0928 Malectin_like 2.6e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0928 - - gmx:100807148 1584.7