Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0917 ATGGCCGCTTTGTTACCTTGCGTGCCCAGCTTAGTCTCCGTTCCGTTCGGGAACAACTGGAGCAGAACCCATCTACCACACCGACCTCACTCCTTCTCCGGTTCGACCAGGCACTTCCTTCGCGGTTCGCTCTCCGTAGCCCGGTTCGGTCTCAAACCCGGTTTCTTGCCCGACCCGGACGCCGCCGCCGCAGCCGAAGGCGTTATCAGAGAGCTGTTCACCCGAGCGGAGGGTTTTCTTTACACGGTTGCCGATGCCGCCGTTTCTTCTTCCGACACGGCGGCCACCACCACCACCACCGCCTCTGTCAAACAGAACAACGATTGGTTCTCTGGAATCGCCAATTACATGGAAACCGTTCTCAAGATACTCAAGGATGGACTTTCTTCTGTACATGTGCCATATGCTTATGGTTTTGCAATTATACTTCTCACGGTTCTCGTAAAAGCTGCCACATTTCCATTGACAAAAAAACAGGTTGAATCTGCCATGGCTATGCGAACTTTGCAACCACAAATAAAAGCTATCCAGCAACGGTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACGGCTCGGTTGTATAAATTAGCAAACATTAATCCTCTAGCAGGATGCCTCCCCACACTCGCAACTATACCAGTGTGGATCGGGCTATATCGAGCACTTTCAAATGTGGCAGATGAGGGACTGCTTAATGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCGGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTCGGATGGTCAGATACATTGGCTTACCTTGTATTGCCGGTCTTGCTGGTTTTCTCTCAGTACATCTCTGTCCAAATAATGCAATCATCACAGGCTAATGATCCCAACATGAAGACTTCTCAAGCCTTAACCAATTTCCTTCCATTAATGATTGGTTATTTTGCTCTCTCAGTTCCTTCTGGTCTCAGCCTTTACTGGTTAACAAACAATATACTGAGTACTGCACAACAAGTATTTCTTCAAAAGTCAGGAGGTGCAAAAAACCCTGTGAGTCCGGTACAAGATGATATCATGAAGGATAACCTGACGCAGATTCCGAAGCCATTATCTAAACTCAGCTCCACAAAAGTGGAAGACGCCACTCAAGCCAGGCAAGGTGAGAAATCGACATCAGAGGGGCCTCAACGTGGTGAGAAGTTTAGGCAAATAATGGAGCAAGAGGCAAGGAGAAAAAAGCAGAGAGAAGAAGAAAAAAGGAAAGCCGAGGAAGCAGCAGCTAAAGCAACACATGATAAAACAATAGAAGGGGGAAATCAAACCGAAGGTGATTTAGTTGTTGAAAAATCTCAGTCTGTGGCTGCTGATACTGATCTACCCATATCTGGAATAGTAAACGGTAACCAATCAAGTAAAGATTTGGAAGGAAATCAGAATTCCACATCTACATCTGAGACAGAAAACGACCAAGTTTCTGCTCATTCCAAAGTTGGAATAAATGACAAAAGTCTAGACCAGGAACCAAGAGAAGTATTAACAACCACAGCCACCACAAAAAAGCAACCTCCACGAGAAGACCAAGATCATGTGGCAAAGGATTGA 1626 0.4631 MAALLPCVPSLVSVPFGNNWSRTHLPHRPHSFSGSTRHFLRGSLSVARFGLKPGFLPDPDAAAAAEGVIRELFTRAEGFLYTVADAAVSSSDTAATTTTTASVKQNNDWFSGIANYMETVLKILKDGLSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLNEGFFWIPSLAGPTTIAARQNGGGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVFSQYISVQIMQSSQANDPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGAKNPVSPVQDDIMKDNLTQIPKPLSKLSSTKVEDATQARQGEKSTSEGPQRGEKFRQIMEQEARRKKQREEEKRKAEEAAAKATHDKTIEGGNQTEGDLVVEKSQSVAADTDLPISGIVNGNQSSKDLEGNQNSTSTSETENDQVSAHSKVGINDKSLDQEPREVLTTTATTKKQPPREDQDHVAKD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0917 541 Pfam 60Kd inner membrane protein 137 351 IPR001708 GO:0016021|GO:0032977
Lja6g0917 541 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 137 351 IPR028055 -
Lja6g0917 541 MobiDBLite consensus disorder prediction 470 507 - -
Lja6g0917 541 MobiDBLite consensus disorder prediction 377 541 - -
Lja6g0917 541 Coils Coil 410 440 - -
Lja6g0917 541 MobiDBLite consensus disorder prediction 390 446 - -
Lja6g0917 541 PANTHER OXA1 22 458 IPR001708 GO:0016021|GO:0032977
Lja6g0917 541 PANTHER BNAA09G28180D PROTEIN 22 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0917 Lja-Chr6 20232316 20243058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0917 69 427 Chloroplast and Mitochondria Gene Families AT2G28800 56.825 1.46e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0917 K03217 - gmx:100802546 759.214