Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0893 ATGGCGGAGAAAACCAGCAAAGGTTCTGTGAGTTTAGAAGGAGAGAAGGTGCTATTGGTTCCATACATGGAGGCACATGTCCCCAAATATCATTCTTGGATGCAAGACCCTTCTCTTCTTCAAGCCACTGGTTCTGAGCCTCTTACCCTTGATCAGGAGTACCAGATGCAACTCTCCTGGTCACGTGATCCTAACAAGGAGACGTTTATTATTCTGGACAAGGATTTGGTTGTTGGAGATCTCTCACATGGGCAACCCCATGTTGAAGCCATGGTTGGTGATGTAAATGTATTCATGAATGACCTGGACAATCCTCATATGGCAGAGGTTGAAATAATGATAGCTGAACAAAAGAGCCGTGGAAAAGGACTAGGAAAGGAGTCTGTTCTGATGATGATGGCCTTTGCTGTTGAGAAGTTGGGAATCAATACCTTTCAAGTTAAAATTGGAGAATCAAATGTTGCATCCATTAACCTATTCAGAAAATTGGGATTTGTGCAAACTTCACATAGTAACATCTTCAAAGAGGTCACTTTGGAATTGCAAATTACACGGACCAAGAATGAGGAGATGCTTGGTTTGATGGGTATTATGATCAAACATACATAA 609 0.4171 MAEKTSKGSVSLEGEKVLLVPYMEAHVPKYHSWMQDPSLLQATGSEPLTLDQEYQMQLSWSRDPNKETFIILDKDLVVGDLSHGQPHVEAMVGDVNVFMNDLDNPHMAEVEIMIAEQKSRGKGLGKESVLMMMAFAVEKLGINTFQVKIGESNVASINLFRKLGFVQTSHSNIFKEVTLELQITRTKNEEMLGLMGIMIKHT* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0893 202 PANTHER N-ACETYLTRANSFERASE 9 8 194 IPR039135 GO:0008080
Lja6g0893 202 Gene3D - 6 176 - -
Lja6g0893 202 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 168 IPR016181 -
Lja6g0893 202 Pfam Acetyltransferase (GNAT) domain 17 166 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja6g0893 Acetyltransf_3 3.3e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0893 K25762 - gmx:100817900 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0893 6 19629755 19633814 Lja6g0893 6 19629755 19633814 ECH