Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0875 ATGATACTGTCCTTCTCATCTGTTCAGTACTTAGTACTAGCTCTTCCTCCTCTGTTGGTACTCTTCATTATCCTGTTGAAGAAGAAATCCATCAACAAGAAACTTCCACTTCCACCAGGTCCAAGAGGCCTTCCTATCATAGGTAACCTTCATCAACTTGACAGTTTGAATTTCCATTTTCAACTCTGGAACCTCTCAAAGATCTATGGTCCAATTTTTTCCCTTCGATTTGGCATCAAGAAAGCCATCATTATTTCCACACCTAAAATGGCCCAAAAGATCCTCAATGACCATGATCTTGCTGTTTGCACCAGAGCTCCCACACTTAGCCAGAAAAGAATTTCTTACAATGCCATGGACATGAATTTTTCCCCATACAATGATTACTGGAGAGAAATCAGAAAAATTGCTGCCATCCATTTCTTCAGCGCGAAAAAGGTCTCTAGCTTTTCCCATGTAAGAAAATATGAGGTCAAGCAAATGATTCAAAAGATATCTAGCCATATTTCTTCTTCCAAAGTCACAAACTTGAGTGAGATCATAATGTCTGTCGCGAGCTGTACTATTTCCAGGATTGCTTTTGGGAGAATCTATGATGAGGATGGAGCTGAAAACAGCATCTTCCATAGCCTTCTTGTTCAGGGACAAGCCATGTTTCTAACCTTCTTCTTTTCAGATTACATTCCTTTCATGGGGTGGATTGATAAACTCACAGGCTCACTCGCTCGTCTTGATAAAACTATCAACTCGTTCGATGCCTTTTTCCAACAAGTCCTTGATGAGCACCTCGATCCTAATAGGATCAAAGATCAAACCCAGGAGGATGATATAGTTGATACGCTACTCCAGCTTAGAAACCAGGGTTCCCTCTCAATTGATCTCACCGATGAACACATTAAAGCTTTCATGATGGACCTTCTTATAGGATCAACTGACACGAGTGTAGCCGCATCAGTTTGGCTCATGACTGGATTAATGAAGAACCCAACAGCAATGAAGAAAGTCCAAGAAGAAATAAGAAATCTATGTGGCAACAAAGACTTCATCGATGAAGTGGATATTCAAAAACTCGAATACTTGAAGGCAGTTATAAAAGAGACACTCAGATTTTATCCGCCGGCGCCACTAATACCAAGAGAAACAATTAAAAATATTATCGTAGATGGGTATGAAATACCAGCCAAGACAATTGTTTATGTAAACGTTTGGGCCATCCATAGGGATCCTGAGGCTTGGAAAGACCCACACGAGTTTAATCCTGATAGATTCCTAAACAAGAACATAGAGTTTAAGGGACGAGACTTTGAGCTCATTCCGTTTGGTGCCGGGCGTAGAGTTTGCCCTGGCATGCCACAAGGAATCGCCACGTTGGAGCTCATAACTGCAAACCTATTAAACTCATTTGATTGGGAAACGCCTCCTGAGATGACGCGGGAAGAGATTGATGATGAAGGGCTACAAGGACTTGCTCGACACAAGAAAAATCACCTGTGTCTTATTGCCAAGAACCGTGAGTGA 1518 0.4157 MILSFSSVQYLVLALPPLLVLFIILLKKKSINKKLPLPPGPRGLPIIGNLHQLDSLNFHFQLWNLSKIYGPIFSLRFGIKKAIIISTPKMAQKILNDHDLAVCTRAPTLSQKRISYNAMDMNFSPYNDYWREIRKIAAIHFFSAKKVSSFSHVRKYEVKQMIQKISSHISSSKVTNLSEIIMSVASCTISRIAFGRIYDEDGAENSIFHSLLVQGQAMFLTFFFSDYIPFMGWIDKLTGSLARLDKTINSFDAFFQQVLDEHLDPNRIKDQTQEDDIVDTLLQLRNQGSLSIDLTDEHIKAFMMDLLIGSTDTSVAASVWLMTGLMKNPTAMKKVQEEIRNLCGNKDFIDEVDIQKLEYLKAVIKETLRFYPPAPLIPRETIKNIIVDGYEIPAKTIVYVNVWAIHRDPEAWKDPHEFNPDRFLNKNIEFKGRDFELIPFGAGRRVCPGMPQGIATLELITANLLNSFDWETPPEMTREEIDDEGLQGLARHKKNHLCLIAKNRE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0875 505 PANTHER CYTOCHROME P450 71B11-RELATED 11 503 - -
Lja6g0875 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 503 - -
Lja6g0875 505 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 Gene3D Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 Pfam Cytochrome P450 38 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0875 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0875 Lja-Chr6 19419868 19421835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0875 11 499 Cytochrome P450 AT4G31500 44.422 1.39e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0875 - - lja:Lj6g3v1138550.1 726.857