Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0868 ATGGCTCGTGGTGAATTGGGAGTGCTTACTGCCCTTGATACTGCCAAGACACAATGGTATCACTTCACTGCCATCATCATCACTGGTATGGGATTCTTCACAGATGCATACGACCTGTTCAGCATACCAAACGTTACCAAGTTGCTTGGCCGAATATACTACACAAAAGAAGGTTCACCAAAGCCGGGAACCTTGCCTGCAAATGTTTCAGTTGCAGTTAACGGTGTTGCGCTCTGTGGCACACTAGCAGGCCAACTTTTCTTCGGTTGGCTAGGAGATAAAATGGGTAGGAAAAAGGTTTATGGCCTAACTCTTGCCATCATGGTCGTCTCTTCTCTTGCCTCTGGCCTCTCCTTTGGGCACACCCCAAAGGGTGTGATTTCCACCCTTTGTTTCTTCAGGTTCTGGCTTGGTTTTGGCATTGGTGGTGACTACCCTCTCTCAGCCACCATCATGTCAGAATATGCAAACAAAAAGACTCGCGGCGCATTCATAGCCTCAGTGTTTGCTATGCAAGGCTTTGGAATCTTGGCTGGCGGGATTGTTTCCCTCATAGTTTCCGCAGCATTCGATCACGCATTCAAGGCTCCGCCATACAAGGATGACCCTGCAGCATCCCTTGTCCCCGAAGCCGACTACGTCTGGCGCATCATCCTCATGTTCGGCGCCGCCCCTGCAGCTCTCACCTACTACTGGCGCATGAAAATGCCCGAGACAGCAAGGTACACAGCACTCGTCGCGAAAAACGCGAAACTCGCAGCGCAGGACATGTCAAAGGTGCTGCAAATGGAGGTTGAAGCTGAGCAGGAAAAGACGGACAAGATAGCCGAGCCCGAAACGCAACAAAACAACAAGAACAGCTTCGGCTTGTTCAGCAAGGAATTTGCTCGAACACATGGCGTGCACTTGCTCGGAACCACTTCAACATGGTTTCTCCTAGACATTGCATACTACAGCTCAAACCTCTTCCAAAAAGACATCTACAGCAGCATTGGGTGGCTCCCTCACGCGGAGGAAATGAACGCGATTCAGGAGGTTTACAAGGTTGCAAGAGCATCAACACTGATAGCACTCTGTGGCACTGTACCAGGGTACTGGTTCACAGTGGCATTCATAGACCATCTGGGTCGTTTCATCATACAGCTTATGGGGTTCTTCTTCATGACAGTGTTCATGTTCGCACTCGCAATTCCTTACAATCACTGGACACAGAAGGAACACAGAATTGGGTTTCTTGTGATGTACGCATTCACGTTCTTCTTCGCGAATTTTGGTCCAAACTCGACCACTTTTGTTGTGCCTGCAGAGATTTTCCCTGCGAGGTTGAGAACTACATGCCATGGGATATCCTCTGCTGCAGGGAAAGCTGGAGCGATTGTGGGTGCGTTTGGGTTCTTGTATGCTTCACAGGACAAGGATGAAGCAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGCATGAAGAACACTCTTATTGTGCTTGCTGTGACGAATTGTCTTGGCATGGTTTGCACGTTCATGGTGCCAGAATCTAAAGGGAAATCGTTGGAGGAGTTGAGTGGTGAGAATGAAGAAGATGAAGGTGATGAGAGTGTTGAGACACAAGGTTCCTCTAGTAGGACTGTTCCGGTGTGA 1635 0.4924 MARGELGVLTALDTAKTQWYHFTAIIITGMGFFTDAYDLFSIPNVTKLLGRIYYTKEGSPKPGTLPANVSVAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLAIMVVSSLASGLSFGHTPKGVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLIVSAAFDHAFKAPPYKDDPAASLVPEADYVWRIILMFGAAPAALTYYWRMKMPETARYTALVAKNAKLAAQDMSKVLQMEVEAEQEKTDKIAEPETQQNNKNSFGLFSKEFARTHGVHLLGTTSTWFLLDIAYYSSNLFQKDIYSSIGWLPHAEEMNAIQEVYKVARASTLIALCGTVPGYWFTVAFIDHLGRFIIQLMGFFFMTVFMFALAIPYNHWTQKEHRIGFLVMYAFTFFFANFGPNSTTFVVPAEIFPARLRTTCHGISSAAGKAGAIVGAFGFLYASQDKDEAKRDAGYPAGIGMKNTLIVLAVTNCLGMVCTFMVPESKGKSLEELSGENEEDEGDESVETQGSSSRTVPV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0868 544 Pfam Sugar (and other) transporter 31 519 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja6g0868 544 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 534 - -
Lja6g0868 544 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 534 - -
Lja6g0868 544 MobiDBLite consensus disorder prediction 515 544 - -
Lja6g0868 544 TIGRFAM 2A0109: phosphate:H+ symporter 11 522 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja6g0868 544 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 513 IPR020846 GO:0022857
Lja6g0868 544 SUPERFAMILY MFS general substrate transporter 12 520 IPR036259 -
Lja6g0868 544 CDD MFS_PhT 25 512 - -
Lja6g0868 544 Gene3D MFS general substrate transporter like domains 280 536 IPR036259 -
Lja6g0868 544 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0868 Lja-Chr6 19325918 19328196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0868 1 544 Inorganic Solute Cotransporters AT2G32830 74.542 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0868 K08176 - tcc:18602672 845.884