Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0852 ATGGGGTTCCCAGCTCCTACCCTTTACATTCTCCTCCTAATTCATGTTGTTGCTCTGCTGCACAGACCCATCTTTGCAGTAAAAAAGTCATATGTGGTGTACTTGGGAGCCCACTCACATGACCCCGAACTGTCTTCAGTTGACTTCAATCAAGTGACTGAGTCCCACTATGAGTTTCTGGGATCATTTTTGGGAAGTTCAAATACAGCCAAAGAATCCATCTTTTACTCCTACACAAGGCACATCAATGGCTTTGCTGCAAATTTGGAAGAAGAAGTTGCAGCTGAGATTGCAAAGCATCCCAAGGTGTTGTCATTGTTCGTGAATAGTGGAAGGAAACTACACACCACTCGTTCATGGGGATTCATGGGGCTAGAGGATAATGGTGTGATCCCATCCAGCTCAATCTGGAACAAAGCCAGATTTGGTGATGGTGTCATTATTGGAAACCTCGACACAGGCGTTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCCAAGTGGAGAGGAATCTGTGATAACGCCATTGATCACAGTTTTTACTGCAACAGGAAGCTAATTGGGGCAAGGTACTTCAACAAAGGCTACTCATCTGTTGCTGGCCCACTGAACTCCTCCTTTGATTCACCTCGTGACAGGGAAGGCCATGGATCCCACACTCTCTCCACAGCTGGTGGAAACATGGTACCTGGTGTCAGTGTCTATGGCCAAGGCTATGGAACAGCAAAAGGTGGCTCACCAATGGCCAGGGTGGCAGCATACAAGGTTTGCTTTCCCCCAATTGATGGTGATGAGTGTTTTGATGCAGACATACTTGCTGGCTTTGACATGGCCATCCATGATGGTGTTGATGTTTTGTCTGTGTCCCTTGGTGGCTCTGCCTCTACATTTTTCAATGACAGTGTTGCCATTGGATCTTTTCATGCTGCTAAGAGAGGCATTGTGGTGGTTTGCTCTGCTGGCAACAGTGGCCCTGCTGAGGCTACTGCTGAAAACGTTGCACCATGGTACATCACAGTTGGTGCCAGCACAATGGACAGAGAGTTCCCCAGTTATGTTGTCCTTGGTAACAACATGAGATTCAAGGGTGAGAGCTTAGCAGATGCGAGATTGGCACACAAGTTGTACCCACTTGTCAAAGCTACAGATGTTAAATTGGCAAGTGCAACTGTTCAAGATGCTGTGCTGTGCCAGAATGGAACTCTGGATCCCAACAAGGTCAAGGGAAAGATTGTACTGTGCCTGAGAGGAATAAATGCAAGAGTGGACAAGGGAGAGCAAGCTTTGCTAGCTGGTGCAGTAGGAATGGTCCTTGCCAATGATAAGACTAATGGGAATGAAATTTTAGCTGATCCTCATGTCCTTCCTGCTTCTCATATCAATTTCAGTAATGGTGTTGCTGTCTTTGATTACGTCAACTCAACAAAGTTTCCAGTGGCTTATATTACACATCCTGACACCAAATTGCATACCAAGCCAGCCCCCTTCATGGCAGCATTTTCATCTAAAGGACCAAATACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCGGGAGTGTCAGTTTTAGCGGCTTTCACTGAAGCAGAAGGGCCAACTAACCAAGAGTTCGACCAACGCCGAATCCCTTACAACTCGGTCTCAGGGACATCAATGTCCTGTCCTCATATTTCAGGCATTGTGGGCCTGCTGAGAACCATATATCCTTCTTGGAGTCCTGCTGCTATCAAATCAGCAATTATGACCACAGCTACTACGCTAGATAATGAGAGGGAGCCACTGCTGAATGCTACTAACAGCCAGGCAACACCATTCAGCTATGGCTCAGGACATGTCCAACCAAACACAGCAATGGATCCTGGCCTAGTTTATGACACAACAATTGATGATTACCTGAACTCCCTATGTGCTTTAGGCTACAATGAAACACAAATCTCAGTTCTTTCAGAAGGTCCGTATCAATGCAACAAGAACTTTAGTCTCCTCAACCTGAATTATCCTTCAATCACGGTCCCGAATCTCAAAGGGACAGTCACAGTTACAAGGACATTGAAAAACGTTGGTTCTCCTGCAACATACATTGCTCACGTTCAACATCCAAATGGGGTCACCATTTCTGTGAAGCCAAACATGTTGAAGTTTAACCATGTTGGTGAAGAGAAGAGCTTTAAAGTGAAGTTGAAGGTTAAGCAAGGAAAAACAACAAATGCATATGTGTTTGGGAAGCTGATATGGTCAGATGGCAAGCATTATGTGAGGAGTCCAATAGTTGTGAAGGCCCTCTAG 2310 0.4563 MGFPAPTLYILLLIHVVALLHRPIFAVKKSYVVYLGAHSHDPELSSVDFNQVTESHYEFLGSFLGSSNTAKESIFYSYTRHINGFAANLEEEVAAEIAKHPKVLSLFVNSGRKLHTTRSWGFMGLEDNGVIPSSSIWNKARFGDGVIIGNLDTGVWPESKSFSDEGFGPIPSKWRGICDNAIDHSFYCNRKLIGARYFNKGYSSVAGPLNSSFDSPRDREGHGSHTLSTAGGNMVPGVSVYGQGYGTAKGGSPMARVAAYKVCFPPIDGDECFDADILAGFDMAIHDGVDVLSVSLGGSASTFFNDSVAIGSFHAAKRGIVVVCSAGNSGPAEATAENVAPWYITVGASTMDREFPSYVVLGNNMRFKGESLADARLAHKLYPLVKATDVKLASATVQDAVLCQNGTLDPNKVKGKIVLCLRGINARVDKGEQALLAGAVGMVLANDKTNGNEILADPHVLPASHINFSNGVAVFDYVNSTKFPVAYITHPDTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVLAAFTEAEGPTNQEFDQRRIPYNSVSGTSMSCPHISGIVGLLRTIYPSWSPAAIKSAIMTTATTLDNEREPLLNATNSQATPFSYGSGHVQPNTAMDPGLVYDTTIDDYLNSLCALGYNETQISVLSEGPYQCNKNFSLLNLNYPSITVPNLKGTVTVTRTLKNVGSPATYIAHVQHPNGVTISVKPNMLKFNHVGEEKSFKVKLKVKQGKTTNAYVFGKLIWSDGKHYVRSPIVVKAL* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0852 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Lja6g0852 769 Pfam PA domain 402 472 IPR003137 -
Lja6g0852 769 ProSiteProfiles Serine proteases, subtilase domain profile. 119 626 - -
Lja6g0852 769 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Lja6g0852 769 Gene3D - 643 769 - -
Lja6g0852 769 SUPERFAMILY Subtilisin-like 114 630 IPR036852 GO:0004252|GO:0006508
Lja6g0852 769 Pfam Subtilase family 143 604 IPR000209 GO:0006508|GO:0008236
Lja6g0852 769 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Lja6g0852 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Lja6g0852 769 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lja6g0852 769 CDD Peptidases_S8_3 113 593 IPR034197 -
Lja6g0852 769 SUPERFAMILY PA domain 399 485 IPR046450 -
Lja6g0852 769 CDD PA_subtilisin_like 358 488 - -
Lja6g0852 769 MobiDBLite consensus disorder prediction 212 231 - -
Lja6g0852 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Lja6g0852 769 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Lja6g0852 769 Gene3D - 352 496 - -
Lja6g0852 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 16 768 - -
Lja6g0852 769 PANTHER PEPTIDASE S8 16 768 - -
Lja6g0852 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0852 Lja-Chr6 19163007 19174083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0852 30 767 Subtilisin-like Serine Gene Family AT2G04160 64.238 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0852 - - gmx:100788007 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0852 6 19163007 19174083 Lja6g0852 6 19163007 19174083 ECH