Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0837 ATGGAGGGGATTAAGAGAAAGAACCAACTTTTCATTTTTTCTTTGCTCGTCTTACTTGTGCTCCCAACTTTAATTGTCGCAGAATGCACATGTGACCAAGAAGATGAAGATAGGGACAAAACCAAAGCTCTTAGATACAAAATAGCAGCTTTAGTGTCAATCCTATTTGCAAGTGCAATTGGTGTTTGTATTCCACTTCTTGGCAAAATTATACCGGCTTTGAGCCCGGAGAAAGACATCTTCTTTATCATTAAGGCTTTCGCGGCCGGCGTTATACTTTCTACTGGATTCATTCACGTGCTTCCTGACGCCTTTGAGAACCTCACCTCGCCGTGTCTAAACGAGCATCCGTGGGGAGATTTTCCCTTCACTGGATTTGTGGCTATGTGCACGGCCATGGGAACCCTCATGCTTGAAACTTACGCCACTGCATATTTCCAGAAACAACATTTTAAGAGAGGTCAAGTTGAGGCTACGGACCCGGAAAAGGAAGCGGGACACGAAGGGCATGTCCACGTTCACACCCATGCTACCCATGGACATGCACATGGACATGCTTCTATTGATGACTCCTCAGAACTTCTTCGTCATAGGGTCATATCACAGGTCTTGGAATTGGGGATTGTTGTTCATTCTGTAATCATAGGAATTTCTTTGGGAGCGTCAGAGAGTCCCAAAACAATAAGACCCCTCGTAGCTGCGTTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACACAGGCAAAATTCAAAAGGCTCTCTGTTACAATCATGGGATTATTCTTCGCTTTAACTACTCCGGTAGGGATTGGAATTGGCATAGGGATCACTAATGTTTATGATGAAAGCAGTCCAACAGCCCTTATTGTTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATCTTAATTTATATGGCACTTGTGGATCTTCTTGCTGCTGATTTCATGAATCCGAGAATGCAAAACAGTGGTCGGCTTCGATTAGGATCCAATCTATCTCTTTTGCTAGGAGCTGAGCGCCATTCTTCCATTACCATTATCATCAAAAGGGGAACCAATACATGGCGTCAGACAAAGGACACTCGCGAGAAGCAGAGAGCGAAGAGGCCATGGAAAGCAAGACATAAACAACTACTGGATATTGCTATTGAGTGA 1170 0.4393 MEGIKRKNQLFIFSLLVLLVLPTLIVAECTCDQEDEDRDKTKALRYKIAALVSILFASAIGVCIPLLGKIIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMLETYATAYFQKQHFKRGQVEATDPEKEAGHEGHVHVHTHATHGHAHGHASIDDSSELLRHRVISQVLELGIVVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQAKFKRLSVTIMGLFFALTTPVGIGIGIGITNVYDESSPTALIVEGIFNAASAGILIYMALVDLLAADFMNPRMQNSGRLRLGSNLSLLLGAERHSSITIIIKRGTNTWRQTKDTREKQRAKRPWKARHKQLLDIAIE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0837 389 PANTHER ZINC/IRON TRANSPORTER 18 347 - -
Lja6g0837 389 Pfam ZIP Zinc transporter 46 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja6g0837 389 PANTHER ZINC TRANSPORTER 1 18 347 - -
Lja6g0837 389 TIGRFAM zip: ZIP zinc/iron transport family 29 349 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0837 Lja-Chr6 18768940 18771514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0837 16 351 Inorganic Solute Cotransporters AT3G12750 55.072 6.93e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0837 K14709 - gmx:547695 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0837 6 18768940 18771514 Lja6g0837 6 18768940 18771514 PCT