Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0836 ATGAATCGCTATCAAAATCCTCCCATGATGCTAATGATCATGGTACTGCTCATGATAAATCTCGGGAGTGCTCACAAGAACATTCACTTCAACTCCAGTCTGTGTCCGTTCCGTGTATCATGTAGTCATAATGAGAAGATGCTTGAGCTGCAAGCAGTTCCAGTCCCGGTAAAACTCCTCATCAGTCACATTGATTACAAATCTCGACAATTACTAGCATATGACCCTGATAACTGTCTTCCACGAATCTTACTAACACTCAACTTTTCATCAATCTTTCCTTTTCGACCACTTCCTACTGCAACCTCAACCAATATTACTTTCTTCGACTGTTCTTCGACTGGGCAACGATATCTGAGAACCATGGACCAAGTGTATGGCTACGGGCAAGACATGTTTTCTTGCCCGATTTATGCCACTTACTCTTATGAAAGCTTCGTTGATTTGGATCTAACTTCCTGCACCAAACTTTCTGAACGCGTTTTGCCACTAAGCAACGTTTACCCTATAAGAGAAAATAGACTCTTATTGATATGGTCAGATTATTTTTTGGATACGAGATGCTTTAAATGTAAGCACAAATCAAACAAGAAGACTGTATCCACTATTTTGGTCACTGCAGGTGGAGTTGTTGGTTCAGCTGTGCTGGTGTTTATGCTAGGTGCCATCATTCGTATATATCGTTATTATAAGATGAAAGGGGAGGATCATGCAAGAGTCGAGAACTTTTTGAAGGATTACAAGGCTTTGAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACACACCAGTTCAAGGAAAAGCTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCACACAAATTCTAGTTGCTGTCAAGATCCTCAACAACACAGAGGGAGATGATGGGACAGAGTTCATCAATGAAGTGGGAACCATGGGAAAAATCCACCATGTCAATGTAGTTCGCTTGCTTGGTTTCTGCGCTGATGGGTTTCATAGAGCTCTAGTGTATGATTTTTTTCTGAAAGGGTCACTGCAGAATTTCATCATATCTACACCAAACAACAAGGATAGTAAAACCTCCCTTGGATGGGAAAAATTGCTAGAGATTGCTCTAGGAATAGCTACAGGAATTGATTATCTTCACCAAGGTTGTGATCAGAGAATTCTCCACTTTGACATCAATCCTCATAACGTCTTGCTTGATGACACTTTCACTCCAAAGATTACTGACTTTGGTTTAGCTAAATTGTGCTCCAAAAATAGAAGCACTGTGTCCATGACTGCAGCTAGAGGAACACTAGGCTACATGGCACCGGAAGTTTTTTCTAGAAACTTTGGCAATGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGTTGTTGTTAGAGATGGTTGGAGGAAGAAAGAATATTGTAAGCAGTGCTACTGGTCAAGAAAATGATAGTGTTCGAGTTTTGTATCCAGATTGGATACATTGTTTAGTTGAAGGAAGAGATATACATGTCCCTATTGATGGTGATGATGATGAAGAAGAGGGAGATATTGAAATTGCAAAGAAACTGGCCATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCAGATGCTCCAAGGAGAGGGAGACAAGTTAAAAGTTCCCACCAACCCTTTTCAGCCAAAAGCTTCAACTAGTACTAGCACTAGTAGTAGTAGTACTATTGTTGCTGCAAAACGTCTAAATTTTGAGCTGGAAGTGATTCAAGAATTAGATTAG 1788 0.4055 MNRYQNPPMMLMIMVLLMINLGSAHKNIHFNSSLCPFRVSCSHNEKMLELQAVPVPVKLLISHIDYKSRQLLAYDPDNCLPRILLTLNFSSIFPFRPLPTATSTNITFFDCSSTGQRYLRTMDQVYGYGQDMFSCPIYATYSYESFVDLDLTSCTKLSERVLPLSNVYPIRENRLLLIWSDYFLDTRCFKCKHKSNKKTVSTILVTAGGVVGSAVLVFMLGAIIRIYRYYKMKGEDHARVENFLKDYKALKPTRFSYADIKRITHQFKEKLGEGAHGAVYKGKLSTQILVAVKILNNTEGDDGTEFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFLKGSLQNFIISTPNNKDSKTSLGWEKLLEIALGIATGIDYLHQGCDQRILHFDINPHNVLLDDTFTPKITDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIVSSATGQENDSVRVLYPDWIHCLVEGRDIHVPIDGDDDEEEGDIEIAKKLAIVGLWCIQWHPMHRPSMKTVMQMLQGEGDKLKVPTNPFQPKASTSTSTSSSSTIVAAKRLNFELEVIQELD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0836 595 MobiDBLite consensus disorder prediction 555 574 - -
Lja6g0836 595 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 594 - -
Lja6g0836 595 Gene3D Transferase(Phosphotransferase) domain 1 342 561 - -
Lja6g0836 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 594 IPR045874 GO:0004672
Lja6g0836 595 ProSiteProfiles Protein kinase domain profile. 265 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0836 595 Gene3D Phosphorylase Kinase; domain 1 239 340 - -
Lja6g0836 595 Pfam Protein kinase domain 267 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0836 595 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Lja6g0836 595 SUPERFAMILY Protein kinase-like (PK-like) 249 548 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0836 Lja-Chr6 18638554 18640668 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0836 196 576 Receptor kinase-like Gene Family AT1G66910 43.182 1.39e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lja6g0836 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0836 - - lja:Lj0g3v0145559.1 656.751