Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0809 ATGGCGCGGCGGCTCCTCCCCAAGCTCGCGCTAATCGTCGCGGCCCTGGCGGTCCTCTTCTTCTCCCCCTCGCAATCCGCCGTTTTCAGTGTAGATCTGGGTTCCGAATCGGTCAAGGTGGCGGTTGTTAACCTGAAACCTGGTCAAAGCCCGATCTCGATCGCCATCAACGAGATGTCGAAACGGAAATCGCCGGCGCTGGTGTCGTTCCACGACGGCGACCGCCTCCTCGGCGAGGAAGCCGCGGGCCTCGTCGCTCGCTACCCGCAGAAAGTGTATTCCCAAATTCGGGACCTCATAGGGAAACCCTATTCCTCCGCGAAGAGCTTTCTGGATTCAATGTACCTGCCTTTCGATACGAAGGAAGATTCCAGAGGCACCGTGAGTTTCAGAATCGATGAAAACGGCACCGAGTATTCGTCGGAGGAACTGGTGGCCATGTTGTTGGGCTACACTGCAGCTTTGGCTGAGTTCCACGCGAAGATTCCGATCAAGGACGCGGTGATCGCTGTGCCGCCGTATTTTGGGCAAGCTGAACGGAGAGGGTTGCTTCAGGCGGCAGAGTTATCAGGGATTAACGTTCTTGCGTTGATCAACGAGCATTCCGGTGCCGCGCTTCAATACGGGATTGATAAGGATTTTTCCAATGAGTCGAGGCATGTGATTTTCTATGACATGGGTTCCAGCAGTACCTATGCTGCGCTTGTCTATTTCTCGGCTTATAAGAGTAAAGAGTATGGGAAGACGGTGTCCGTGAACCAGTTTCAGGTCCAGGATGTCCGGTGGAACTCAGAACTTGGTGGCCAGCAAATGGAATTGCGATTGGTGGAGTATTTTGCTAATGAATTCAATGCACAAGTTGGTGATGGAATAGATGTGAGGAGATTTCCCAAGGCTATGGCTAAATTGAAGAAACAGGTGAAACGAACAAAAGAAATTCTTAGTGCAAATACAGCATCTCCTATTTCAGTTGAATCACTTCATGGTGACATAGACTTCAGGAGCACAATAACCCGTGACAAATTTGAAGAACTCTGTGAAGATATTTGGGAAAAGTCTCTTTTGCCTTTGAAAGAGGTGCTCGAGCATTCAGGACTCTCAGCGGAACAAATATATGCAGTGGAGTTGATTGGAGGAGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAATTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCGATTGTTCTTGGCGCAGCTCTGCATGCTGCAAATTTAAGTGATGGAATCAAATTAAACCGCAAAATAGGAATGGTTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAGTGGTCTTGATCTTTTGAAAGATGAAAGCTCAAGACAGTTACTTGTACCACGAATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATTAATCATAACAAGGATTTTGAAGTTTCCCTAGCTTACGAAAGTGAACATCAGTTACCACCCGGTGTTACCTCTCCCATAATTGCCCAATACAAGATATCTGGTTTGAAAGATGCAAATGAGAAATACTCTTCCCGGAATCTGTCATCTCCCATCAAGGCAAATATGCATTTCTCTCTTAGTAGAAGTGGAATTCTCTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCAAGGAAAAATTTGACCATAGAGAATTCAACTATTTCGTCAAATACATCAAATGAATCTGGTGCTGGGGACAGTTCTGAAAGCAATGAAAACTTGGAAACTGATAGTGGGATTAATAAGACATCCGACATTAGTGCAGAGGAGCAAATTGATAGTGGGGCTAATAAAACACCCAACATTAGTGCAGAGGAGCAAGCTGTTGCTGAACCTGCTACAGAGAGAAAGCTGAAAAAGCGAAGCTTTAGGGTACCATTGAAGATTGATGAGATAGCAGGATCTGGGATGTCCTTATCAAAAGATATTCTTGCTGAAGCCAAAAGAAAATTACAAGCTCTAGATAAAAAAGATGCAGAAAGGAAAAGAACCGCTGAGTTAAAAAATAATTTAGAAGGATATATATACACTACTAAGGAAAAGATTGAAACTCTTGAGGAGTTTGAAAAAGTTTCTACAAGTGAAGAGCGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCTAATGCTACAGAGTTTCAAGAGCGTCTTGATCAGTTAAAAGCTGTTGGGGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGTCCAGTGGCGGTTGATCTTGCCCGTAAATACATTGATGAGCTAAAACAGATTGTACAAGAGTGGAAAACAACCAAGTCTTGGCTTCCAAAAGACCGAGTAGATGAGGTGATAAACGGTACTGAAAAGTTAAAGAGTTGGTTGGATGAGAAAGAGGCTGAGCAAAAGAAGACTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGCATATTTAAAGGTGTTTGATCTACAAAACAAGGTTGCCAATATTAATAAAATTCCTAAGCCCAAGCCCAAGATTCAGAAGCCCACAAAGAATGAAAGTGAGAGCAGTGGGCAGAACACGGATAGTGATGAAAAAGTTGATGAGCAACCCGAAGCTCATGATGAGTTATGA 2661 0.4431 MARRLLPKLALIVAALAVLFFSPSQSAVFSVDLGSESVKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGDRLLGEEAAGLVARYPQKVYSQIRDLIGKPYSSAKSFLDSMYLPFDTKEDSRGTVSFRIDENGTEYSSEELVAMLLGYTAALAEFHAKIPIKDAVIAVPPYFGQAERRGLLQAAELSGINVLALINEHSGAALQYGIDKDFSNESRHVIFYDMGSSSTYAALVYFSAYKSKEYGKTVSVNQFQVQDVRWNSELGGQQMELRLVEYFANEFNAQVGDGIDVRRFPKAMAKLKKQVKRTKEILSANTASPISVESLHGDIDFRSTITRDKFEELCEDIWEKSLLPLKEVLEHSGLSAEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKIGMVDGSLYGFVVELSGLDLLKDESSRQLLVPRMKKLPSKMFRSINHNKDFEVSLAYESEHQLPPGVTSPIIAQYKISGLKDANEKYSSRNLSSPIKANMHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTISSNTSNESGAGDSSESNENLETDSGINKTSDISAEEQIDSGANKTPNISAEEQAVAEPATERKLKKRSFRVPLKIDEIAGSGMSLSKDILAEAKRKLQALDKKDAERKRTAELKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDQLKAVGDPIFFRLKELTARPVAVDLARKYIDELKQIVQEWKTTKSWLPKDRVDEVINGTEKLKSWLDEKEAEQKKTSGFSKPAFTSEEAYLKVFDLQNKVANINKIPKPKPKIQKPTKNESESSGQNTDSDEKVDEQPEAHDEL* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0809 886 MobiDBLite consensus disorder prediction 567 630 - -
Lja6g0809 886 PANTHER BNAC07G50110D PROTEIN 11 868 - -
Lja6g0809 886 Gene3D Actin; Chain A, domain 4 267 352 - -
Lja6g0809 886 Gene3D - 653 765 IPR029048 -
Lja6g0809 886 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 680 761 IPR029048 -
Lja6g0809 886 ProSitePatterns Heat shock hsp70 proteins family signature 3. 374 388 IPR018181 -
Lja6g0809 886 CDD HYOU1-like_NBD 30 418 - -
Lja6g0809 886 Pfam Hsp70 protein 29 753 IPR013126 GO:0005524|GO:0140662
Lja6g0809 886 Gene3D - 31 418 - -
Lja6g0809 886 MobiDBLite consensus disorder prediction 867 886 - -
Lja6g0809 886 SUPERFAMILY Actin-like ATPase domain 218 420 IPR043129 -
Lja6g0809 886 MobiDBLite consensus disorder prediction 847 886 - -
Lja6g0809 886 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 428 572 IPR029047 -
Lja6g0809 886 Gene3D - 94 147 - -
Lja6g0809 886 Coils Coil 651 671 - -
Lja6g0809 886 PRINTS 70kDa heat shock protein signature 27 40 - -
Lja6g0809 886 PRINTS 70kDa heat shock protein signature 371 387 - -
Lja6g0809 886 PRINTS 70kDa heat shock protein signature 167 187 - -
Lja6g0809 886 PRINTS 70kDa heat shock protein signature 403 423 - -
Lja6g0809 886 PRINTS 70kDa heat shock protein signature 59 71 - -
Lja6g0809 886 Gene3D - 213 400 - -
Lja6g0809 886 PANTHER HSC70CB, ISOFORM G-RELATED 11 868 - -
Lja6g0809 886 MobiDBLite consensus disorder prediction 567 618 - -
Lja6g0809 886 SUPERFAMILY Actin-like ATPase domain 28 212 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0809 Lja-Chr6 17980539 17995633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0809 24 534 Calmodulin-binding Proteins AT3G12580 28.378 3.57e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0809 K09486 - gmx:100786898 1386.7