Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0797 ATGGATTCCGAAACTGGTGATGATGGTGTTGTGGAGAAAGATCCTACGTTACGATATGCACGGTATGATGAAATGTTGGGGAAAGGAGCCTTCAAGACTGTATATAAAGCGTTTGATGAAGTAGATGGTATAGAAGTTGCGTGGAACCAAATTAGTATTGAGGATGTTTTGCAGTCTCCTAGAGATTTGGAGAAGTTGTATTCCGAGGTTCATCTCCTCAAATCGTTGAAACATGAGAATATCATTAAGTTGTATAATTCATGGGTGGATGATAAGACCAAGACTGTTAACATGATAACTGAGCTCTTCACATCTGGGAGTTTGAGGCAGTATCGGAAGAAGCATAAGAATGTGGATATGAAAGCCATCAAGAACTGGGCGAGGCAGATTCTTCGAGGACTATGCTATCTGCACAGCCACAGTCCTCCTATTATTCACAGGGACCTAAAATGTGATAATATTTTTGTTAATGGGAACACTGGGCAAGTTAAGATTGGAGATCTTGGATTGGCGATTGTCATGCAGCAGCCTACTGCCCGGAGTGTTATTGGTACACCAGAGTTCATGGCCCCAGAGCTATATGAGGAAGAATACACTGAACTTGTCGACATATATTCCTTTGGCATGTGTATCCTGGAAATGGTCACCTGTGATTTCCCGTATAGTGAATGTAAAAATCCGGCACAGATATATAAGAAAGTTACTTCTGGTATAAAGCCCGCTGCTCTTGCTAAAGTAAATGATCCTCAAGTGAAACAATTTATAGGGAAGTGTCTAGTTCCAGCTTCTATGAGATTGCCTGCATCTGAACTACTGAAAGACCCATTCCTTGCGACTGAAAACTCAAAGGAGATCAATCATGATATTATGCAGCTTCCTAATCCCTCCATCAAATTAGTGAATCCACCAACTTGTGAGCCTCATCCCATGGAGATAGATTCAAACCTCAAGCATACCTCACCTGGCTCCTCTGCACCAAAAGTTGAAGAAACTTTTCAAGTTTCGATTTTTGATCTCCTGAGGAAGACTGAGAATAACGAATTTAGGTTAAGAGGGGAGAAAAATGCTGAGAATACAATTTCCCTTACGCTGCGGATTGCTGATACTCATGGTAAGTTTGATACATTTTTTTTATTTGTTTTACTGTGCGCTAAATGTTTATATGTTTATGTAGGTGGAGCAAGGAATATCCATTTTCCATTCTATGTCGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTGGAAGATCTGGAACTCAGGCATGAGGATGTAGCTGTCATTGCCGAGCTAATAAACGACATCATTGTCAAGCTTGTGCCCAACTGGAAACCTTTATGTGAGAACCTCTCTGCTGGAACAGATCACTTGTGTAGGCCTTCTTCTGACGCTCAGAATGATGAACAATTAAACTGCCATTGGCCATTACGATCAAGTGATTTTGATATGAAGGCAATTTGTGAGGGTTTGGTTCATTCGCAGCTTGTTGATGGGGAAGATCAGGAGAAACAGGAATCTGTTTTGTCAGATGTTTCAGCTGAGTATGGGATTACAACTGACTCAGATTTTAATGGTCTAGAGCCAGATTTCTTTATTTTTGACGAGTGCTGCGAGGAATCCAATGGTTTCAATTCAAGTTCAGAATCTTCAGACTTCAGAACTTGTGGTCAAGAAGATGGACACAAGAATCAATCAGATAACTCAGCTAGTAGCTCACTAATCACCTCATGTTCTAGTCCATCCAAAAACATGAACATGTCAAGCACATGTTCTCTTGATTTAGCTGACAAAGATGAGCTGCAGTTGGAACTTGACGCAATTGAAACTCATTATCAGCAATGCCTTCGTGACCTTGTGAAGATGAGGGAGGAAGCCATAGAAGATGTCAAAAGGAGATGGATAACAAGGAAGAAAATATCAGTTATATAA 1932 0.4063 MDSETGDDGVVEKDPTLRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISIEDVLQSPRDLEKLYSEVHLLKSLKHENIIKLYNSWVDDKTKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSHSPPIIHRDLKCDNIFVNGNTGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYTELVDIYSFGMCILEMVTCDFPYSECKNPAQIYKKVTSGIKPAALAKVNDPQVKQFIGKCLVPASMRLPASELLKDPFLATENSKEINHDIMQLPNPSIKLVNPPTCEPHPMEIDSNLKHTSPGSSAPKVEETFQVSIFDLLRKTENNEFRLRGEKNAENTISLTLRIADTHGKFDTFFLFVLLCAKCLYVYVGGARNIHFPFYVDSDTAISIAEEMVEDLELRHEDVAVIAELINDIIVKLVPNWKPLCENLSAGTDHLCRPSSDAQNDEQLNCHWPLRSSDFDMKAICEGLVHSQLVDGEDQEKQESVLSDVSAEYGITTDSDFNGLEPDFFIFDECCEESNGFNSSSESSDFRTCGQEDGHKNQSDNSASSSLITSCSSPSKNMNMSSTCSLDLADKDELQLELDAIETHYQQCLRDLVKMREEAIEDVKRRWITRKKISVI* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0797 643 MobiDBLite consensus disorder prediction 562 585 - -
Lja6g0797 643 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Lja6g0797 643 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0797 643 SUPERFAMILY Protein kinase-like (PK-like) 23 317 IPR011009 -
Lja6g0797 643 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Lja6g0797 643 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 396 437 IPR024678 GO:0004674|GO:0005524
Lja6g0797 643 PANTHER WNK KINASE 1 638 - -
Lja6g0797 643 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0797 643 Coils Coil 598 618 - -
Lja6g0797 643 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 638 - -
Lja6g0797 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lja6g0797 643 Gene3D - 343 445 - -
Lja6g0797 643 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0797 643 CDD STKc_WNK 18 277 - -
Lja6g0797 643 MobiDBLite consensus disorder prediction 544 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0797 Lja-Chr6 17775502 17778790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0797 11 642 MAP Kinase Kinase Kinase AT5G41990 51.572 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lja6g0797 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0797 K08867 - gmx:100783717 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0797 6 17775502 17778790 Lja6g0797 6 17775502 17778790 ECH