Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0763 ATGAATGAAGACGACAATGACTACGAGGACGGTCAATCTATGAATGAAGACGACAATGACTACGCTGATGGACAAAACAACAATTCAGCTTATCAATTTGATGGTGAGGGCCTTGGTGACCACGGCGATTATGATCTTCATGAGACTGAGCTTGACTCCGGTGAAAGGTCGACAAGCGATCTCGATGGCGAAGAAAACAGCTCTATTTGTGATGAGGACGAAGGTTCGCCTGACACAGCTAACCCAGCTGACAATGCAGATGATGTAGTGGGGCTGGCGTTCGAGTTCTACTGTTGGTTTGGAAGATTGTCCGGATTCTCTATTCGTAAAGACACCAAACGCTGGACCAAGAAAGGAGAGGTACGCCAACAAACTTTTGTGTGTCATAGGGAAGGCTTTCGCAAGAACAGTGATGTGAAGCGGACAGCTGAGGCTTGGAGTAATTATAGGTGTGGATGCAAAGCTAAATTACGGGTCCATATTCAGGGTTACTCAAAACGGTGGTACATCAGCTTGTTTGTACACGCTCATAACCACGACGTGCTCCAAAGAAGCCATGCAGCAATGTTGGCTGCACACCGGCAAATGCACGAAGCGGATATCTTGAGTTTGAAATCTCATTTGAGTTCGGGTCTAACAACAGCCGAGGTCTACAATTCACATGCTGCACAGGTTGGGGGGTATAACAACACGCAATACAGCTTGAAAGATCTGCAGAACCAAGTTGGGAAGCAACGACGAGCACATGTTTCAGATGGCCGCAGGGCATTAGATTATCTAGCCTCGTTAGGTATCAAAGACCCATCTATGTTTGTGCGGCACACGGAGGACGCTGATAAAAATCTGGAACATTTGTTTTGGTGTGACGGGATAGGTCGGATGAACTACAGCGTGTTTGGGGATGTTTTAGCTTTCGATGCCACATATAAAAAAACAAATATCGGCGTCCCCTCGTCATATTTTCATGTGTCAATCACCATAATCAAACAACTGTTGTTGGTGGTGCTGTAA 1011 0.4609 MNEDDNDYEDGQSMNEDDNDYADGQNNNSAYQFDGEGLGDHGDYDLHETELDSGERSTSDLDGEENSSICDEDEGSPDTANPADNADDVVGLAFEFYCWFGRLSGFSIRKDTKRWTKKGEVRQQTFVCHREGFRKNSDVKRTAEAWSNYRCGCKAKLRVHIQGYSKRWYISLFVHAHNHDVLQRSHAAMLAAHRQMHEADILSLKSHLSSGLTTAEVYNSHAAQVGGYNNTQYSLKDLQNQVGKQRRAHVSDGRRALDYLASLGIKDPSMFVRHTEDADKNLEHLFWCDGIGRMNYSVFGDVLAFDATYKKTNIGVPSSYFHVSITIIKQLLLVVL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0763 336 MobiDBLite consensus disorder prediction 18 33 - -
Lja6g0763 336 MobiDBLite consensus disorder prediction 1 84 - -
Lja6g0763 336 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 93 311 - -
Lja6g0763 336 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 311 IPR031052 GO:0006355
Lja6g0763 336 MobiDBLite consensus disorder prediction 38 62 - -
Lja6g0763 336 MobiDBLite consensus disorder prediction 1 17 - -
Lja6g0763 336 Pfam FAR1 DNA-binding domain 95 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0763 Lja-Chr6 16733662 16734807 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja6g0763 FAR1 9.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0763 - - mtr:MTR_1g070355 231.491