Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0757 ATGGGAGAAATACATAGAGAAAAATTGTCACAGTGGGAGAAGGAACAAGAAGAAGAAGAAGAAGCACAAGCTCAAATAGATATCTGGAAATATATATTTGGGTTTGTGGAACAGGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAGCTCATGGAAAACCCATGACACTCTCAGAGTTATCATCAACTCTAAGGTGTGACCCTTCATATCTTAACCGCATCATGAGGTTCTTGGTGCGTAGGAAGATATTCAAAACCACAACCTCCACCACGAACCATGGCTGTGATCTCAGCTATGTTCAATCACCTCTGTCTCGCCGTTTGTTGAGAAACGGCGAGCACAGCATGACTGCTTTACTTATGTTGGAGAGCAGTCATGTAATGCTAGCACCCTGGCACGGTCTAAGTGATCGTGTTTTAGTTGATGGCAACCCCTCATTTAAAAAGGTTCATGGTGAAGATGTGTGGGACTATGCCGCCACAAACCTTGAACATAGCAACCTCATCAACGAAGCCATGGCATGTGATGCTAATCTTGTTGTGCCTGTCATGGTTGAAGGTTGCAGTGAGGTATTTGAAGGTCTCACCACCTTGGTTGATGTTGGTGGAGGAAACGGCGCCGCCATGGGCGTGGTAGCAAAGTCTTGCCCATGGATAAAAGCTATTAACTTTGATCTTCCTCACGTCATTGCTGCTGTGGCCCCAAAGTGTAATGGGGTGGAATTTGTTGCTGGGGACATGTTTGCTAGTGTTCCCAAAGCTGACGCTGTATTTATTAAGTGGGTTTTGCATGATTGGGGAGATGAAGAGTGCATCCAGATCTTGAAAAATTGTAGGGAAGCTATTCCGAAGGAAAATGGAAGAGTTATTATTGTGGAAGCGGTGATTGAAGAAGAAGAAGGAAAACATGACAAGTTAAAGGACGTAGGATTGATGTTGGATATGGTGATGATGGCACATACTAACTTTGGCAAAGAAAGAACATTGAAAGAGTGGGAATATGTCATCAAAATGGCTGGATTTAGTACATTCACGGTGAAAGCTATCAATGCCGTGCAGAGTGTTATTTTGGCTTTACCTTGA 1098 0.4372 MGEIHREKLSQWEKEQEEEEEAQAQIDIWKYIFGFVEQAVVKCAIELGIAEAIEAHGKPMTLSELSSTLRCDPSYLNRIMRFLVRRKIFKTTTSTTNHGCDLSYVQSPLSRRLLRNGEHSMTALLMLESSHVMLAPWHGLSDRVLVDGNPSFKKVHGEDVWDYAATNLEHSNLINEAMACDANLVVPVMVEGCSEVFEGLTTLVDVGGGNGAAMGVVAKSCPWIKAINFDLPHVIAAVAPKCNGVEFVAGDMFASVPKADAVFIKWVLHDWGDEECIQILKNCREAIPKENGRVIIVEAVIEEEEGKHDKLKDVGLMLDMVMMAHTNFGKERTLKEWEYVIKMAGFSTFTVKAINAVQSVILALP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0757 365 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Lja6g0757 365 Gene3D - 10 113 IPR036388 -
Lja6g0757 365 SUPERFAMILY "Winged helix" DNA-binding domain 19 116 IPR036390 -
Lja6g0757 365 PIRSF O-mtase 6 365 IPR016461 GO:0008168
Lja6g0757 365 CDD AdoMet_MTases 202 293 - -
Lja6g0757 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 365 IPR016461 GO:0008168
Lja6g0757 365 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 12 361 - -
Lja6g0757 365 PANTHER O-METHYLTRANSFERASE 12 361 IPR016461 GO:0008168
Lja6g0757 365 Pfam O-methyltransferase domain 137 347 IPR001077 GO:0008171
Lja6g0757 365 Gene3D Vaccinia Virus protein VP39 115 365 IPR029063 -
Lja6g0757 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0757 Lja-Chr6 16538675 16541798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0757 41 351 Monolignol Biosynthesis Gene Families AT5G54160 37.539 3.36e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0757 K22588 - gmx:100782951 483.026