Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0747 ATGGATCCTCCTACACAGATTGGGCAGCCCATCCCGCTTAGGAAGATGATCGCGGTGGCATCTATTGCTGCTGGGATACAGTTCGGTTGGGCACTCCAAATTTCCCACCTCACGCCTTACATCCAACTTCTAGGTGTCACACACAAGTCCGCCTCTCTTATCTGGCTCTGTGGGCCCATATCCAAGATGTTGGTCCAGCCCATTGTAGGCTACTACAGTGACCGGTGCACTTCCCGCTTCGGCCGTCGTCGCCCCTTTATTTTTGCCGGCATGATTGGAGTTGTCATTGCGAGAAAACCCCCCCCCCGCGCCATTACCATCTTCATCATGGGCTTTTGGGTACTCGATGTCGCCAATAACATGATTCAGGGTCCTTGTCGTGCCTTCCTCGCCGACCTTTCCACTGCTCAGCCTAGCAGGATCTGTACCGCCTACACCCTATATTCATTTTTCATCAGCGTTGGTAATTTGCTAGGGTATGCGGCAGGTGCATACGGCAGGCTCCACAATATTGTTCCCTTCGCGGAGACCAAGGCATGTGGTGTGTTCTGTGCCAATCTGAAAACATGCTTCTTCCTAGCAATCATCCTTCTGATCCTTGTTGTTGTCTCTGCACTCTTCTATGTACGTGACCCTCCACTCGAGCCTGTTCAGGAGACCGACCACAATGTGAGCAATCAGTGTTTCGTAGGGCTCTTCAACGCCTTTAAGGAGTTGAAGAAGCCTATGTGGATGTTGATGCTGGTGACGACCATCAACTGGATTGCTTGGTACCCTTATATCTTATACAACACTGATTGGATGGCGCGGGAGGTGTATGGTGGGGATGTAGGGACTGAAGCGTATGATGTCGGGGTTCGTGCTGGTGCATTAGGGCTGATGGTGAATTCGGTGATATTGGGTTTGACTTCCTTGGTTGTGGAGCGATTGTGCCGCAATGTTGGGGGAGCTAACACAATATGGGGGATGGTTAATGGCATTCTTGCAGTTTGTCTCGCCATGACAGTGCTCATTGCCAAGGTTGCAGAGCACGAGCGCCAGGTGAGCAGCGGCGCCACCATTGGGAAGCCATCCGCCGGAGTCAAGGCTAGTGCCATGATCCTTTTCTCAGTCCTCGGAATCCCTCTTGCGATTACTTATAACATTCCATTTGCGCTTGCATCAATATACTCAATTAATACAGGGGGAGGTCAAGGTTTATATTTGGGAGTTCTCAATATTGCAATTGCCATTCCACAGGTCGTAATCTATTTGCTTTGA 1260 0.5056 MDPPTQIGQPIPLRKMIAVASIAAGIQFGWALQISHLTPYIQLLGVTHKSASLIWLCGPISKMLVQPIVGYYSDRCTSRFGRRRPFIFAGMIGVVIARKPPPRAITIFIMGFWVLDVANNMIQGPCRAFLADLSTAQPSRICTAYTLYSFFISVGNLLGYAAGAYGRLHNIVPFAETKACGVFCANLKTCFFLAIILLILVVVSALFYVRDPPLEPVQETDHNVSNQCFVGLFNAFKELKKPMWMLMLVTTINWIAWYPYILYNTDWMAREVYGGDVGTEAYDVGVRAGALGLMVNSVILGLTSLVVERLCRNVGGANTIWGMVNGILAVCLAMTVLIAKVAEHERQVSSGATIGKPSAGVKASAMILFSVLGIPLAITYNIPFALASIYSINTGGGQGLYLGVLNIAIAIPQVVIYLL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0747 419 CDD MFS_SLC45_SUC 16 419 - -
Lja6g0747 419 SUPERFAMILY MFS general substrate transporter 14 415 IPR036259 -
Lja6g0747 419 TIGRFAM GPH_sucrose: sucrose/H+ symporter 11 418 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja6g0747 419 Gene3D MFS general substrate transporter like domains 14 221 IPR036259 -
Lja6g0747 419 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 9 418 - -
Lja6g0747 419 PANTHER SUGAR TRANSPORTER 9 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0747 Lja-Chr6 16322891 16325163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0747 6 416 Sucrose Transporter Gene Family AT1G22710 57.763 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0747 K15378 - gmx:100782007 507.679