Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0745 ATGGTTGAACTGAGCTTAATCGATTCTCCATTTCCGAAGCTCTCTACTGACCAGATGCTGGAATTGGAGAGAATCTACAATGACATGGGAGAAAATGCATTTGATCAGAATCTCTGCCAGGAGATTGCTGCAACTTTGAGTGCTGCTAATACATCCATATCATGGGAACAGGTGCAGCAGTGGTTCCAAAATAAGCTTCACGAGTCACAGGATCGAGCTGCTTCACTGAATCAACTTGTTGATATTTCAGATACACCCAGTTTAAGAAGCTCTACAGTTCTACAAGGTAATCGAGGTGCAGTTGTTTCAGACTTGGCATTTGAAGCAAGATCTACGAAAGACTTAGCATGGCATGATGTTTCAATGCTTCTTAACTACAGAGTTCTGAGCACTGGCGAACTTGAAGCTCGTGTACGATATGCTGGATTTGGCAAGGGGGAGGATGAGTGGGTGAATGTGAAATACGGGGTGCGAGATAGATCTATCCCATTGGAACCTTCAGAGTGCCACAAGGTGAAGGATGGAGATCTTGTACTATGTTTCCTGGAAAGGGATGATTATGCCCTCTACTGTGATGCTCGTGTATTAAGCATCCAGAGGAAGCAACACGATGAGACAGATTGCAAGTGCATCTACACTGTTCGATTTCTCCATGACAACTCTGAGGAAGCAATTCATTGGGAGAGGGTATGCTATAGGCCTACACAAGAGGAATCTGTTGTCTACCATAACTCACCAGAACCTACAATAGAACCCAGCATGAGTGCCATAGAGAACTTGTGGGGATGA 789 0.4449 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLSAANTSISWEQVQQWFQNKLHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARSTKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPSECHKVKDGDLVLCFLERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVCYRPTQEESVVYHNSPEPTIEPSMSAIENLWG* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0745 262 Gene3D - 102 163 - -
Lja6g0745 262 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 5 237 - -
Lja6g0745 262 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 5 237 IPR039276 -
Lja6g0745 262 Gene3D - 164 236 - -
Lja6g0745 262 CDD homeodomain 13 65 IPR001356 GO:0003677
Lja6g0745 262 Pfam SAWADEE domain 104 231 IPR032001 GO:0003682
Lja6g0745 262 Pfam Homeodomain 15 65 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0745 Lja-Chr6 16271200 16275011 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lja6g0745 SAWADEE 2.8e-37 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0745 - - gmx:100800332 318.161