Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0741 ATGAATTTCAATGTGAATGAAACTTTGTTCCGCACAATTACACAATACAATGACACCTCTTACACTGTTTGTTATGTAGCTCCACCCAGAACTGTTTCAGATGGAATATGGGGTGACCCGAACAGTGGCAGGACTCCACTGAAATCTTTCTTTCCGATATTTCAATTACAGATCCTTATAATTTTTGCTCTCACACAAATCTGCCGTTGCATCACCAAGCCTTTGGGACTCCCTGTATTTATTTCACAAACGATGGCTGGCTTGATCTTAGTTGGTTTATTTGAGCTAGCACCATTGGAAAGTTACATGACGACGTTATTTCCTTTTGGGACTCATGATATCATTTCAACAATATCATCAATCGGTCTTGTACTTTTTGTTTTTATAAACGGTGTGCAAATGGATTTCAACATGATAAAAAGAACAGGACACAAGGCTTGGGTGATTTCCATAATTGGACTCATAGCACCCTTACTTTTGGGACTTGCCCCAGCAGCTTTTTTCCCTGGAAAATTTGAGAGAAAACATGAAAGTGATATCTATGTATTACTTGTATCGCACTCATTAACTTCATTCGCGGTCGTTGCTTCTTTTCTAACCGAGCTTAAAATGCAAAACTCGGAGCTAGGAAGGTTAGCGTTGTCGTCAGCGTTGGTGAGTGACATGTTGAGCACAATTGTTGCCACGATTGGTGTTGTGGTGGTGAAGACTCCTAATGGGAGTGTGATGGCTAGAGAATTGTTCTTGTTGTTTTCTCTTGTTGTGCTGATTCCACTTCTCTTTCGACCCGCGATGTTTTGGATTATAAGAAAAACCCCAGAAGGAAGGCCTGTGAGTGAGGGTTACATTTACATGATCACCGCAATGGTGTTTGTTCTAGGAGTAGTTTCAGTCAAGATAAATCATGAGTTTGTTCTAGGAGCTTTTATTTTGGGACTTTCTGTTCCGGAAGGGCCACCATTGGGATCTGTGTTGGTTAAGAAGCTTCATTTCTTTGGAAACACATTCCTTTTGCCAATCTTTGTGACCACTTCTATGTTAAGGGCAGATTTGAAGATGGACTATGCATCCACAACAACTTTGGTTATTGGTTTGGTAGTGCTTGTTACCCATGTGGTCAAAATCATTGCTTGCTTTCTACCTGCGCTCTTTTGCCAAATGCCTGTCAGTGATGCTTTAACTGTTGCCTTCATCATGAACACCAAAGGCATAGTGGAAGTTGGTTTCTTCTGTTCCCTCTACGACAATAATTTAATTGGGAGTAAAACATATGCTTTGATGATGATCAGTGTGATGGTCGTAGCCACTATTATGCAGTTGTTAGTGAAGATTTTGTATGATCCTTCAAGAAAATATGCGAGCTATCAACAAAGAAACATCATCAATTTAAAACCCAACTCCGAGCTGAGGATACTCATAACCATTCATAAACCAAACCACATTTCACCCTCAATAGATTTCCTCGACGTCTGTCATCCAACAACAGAACATCCTATTGTTGTGGATGCGCTGCATCTAGTCGAGCTAGTTGGGCAATCCTTACCCATTTTCACCTCTCACGCTCTTCAAAGACAATCATCATCAGCAAGCTCTCACAGGTCATACTCGGATAATGTCATTCTTGCTTTCGATATCTTTCAACATAACAACCAAAATGCGACATCAGTGTTCACTTACACAGCAATATCCCCACCCGACCTCATGTATGAAAATGTGTGCACCCTTGCATTAGATAAACTAGCATCCATGATAGTGCTTCCTTTTCACCAAAGATGGTCAAGTGATGGTGGAATCGAGTCGGATGACAAGAACTTAAGAGCACTAAATTGCAAGGTCCTTGAAACCGCTCCATGCACGGTCGGAATCCACATATGTCGTGCCTCTCACCCGAGAAAAGACTCATGCACTAAACTAGCCATGATTTATTTGGGTGGAACAGATGATCAAGAGGCTTTGTGCTTGGCGAAACGAGCAATCGTGAACCCGAATATTAGGATGGTTGTTTACCACCTTGTTGTTAAGCATCACGCAGCGGAATTGGAGGACCTTATGGTGATGGAAGATTATTTGTTGCAAGAAGTGAAACATGCACATAATGTGGCATATAAAGAAGTGTTTGTGAAAGATGGATCTGACACAACTGCTTTTCTTCGTGACGTCGTGAAAGAGCATGAGTTTTTTATAGTTGGGAGACGACATGAGATCAACGCGCCTCAAACCATGGGACTTACAGACTGGAGTGAATTTCCAGAATTAGGTGTCATTGCTGATGTTCTTTCTTCACCAGATTTTAAGAGCGATGCATCGGTTTTGGTGGTGCAGCAACAACTATCACGCAAGAAAAGTACTAAAAGATTGATATTTTAG 2367 0.4123 MNFNVNETLFRTITQYNDTSYTVCYVAPPRTVSDGIWGDPNSGRTPLKSFFPIFQLQILIIFALTQICRCITKPLGLPVFISQTMAGLILVGLFELAPLESYMTTLFPFGTHDIISTISSIGLVLFVFINGVQMDFNMIKRTGHKAWVISIIGLIAPLLLGLAPAAFFPGKFERKHESDIYVLLVSHSLTSFAVVASFLTELKMQNSELGRLALSSALVSDMLSTIVATIGVVVVKTPNGSVMARELFLLFSLVVLIPLLFRPAMFWIIRKTPEGRPVSEGYIYMITAMVFVLGVVSVKINHEFVLGAFILGLSVPEGPPLGSVLVKKLHFFGNTFLLPIFVTTSMLRADLKMDYASTTTLVIGLVVLVTHVVKIIACFLPALFCQMPVSDALTVAFIMNTKGIVEVGFFCSLYDNNLIGSKTYALMMISVMVVATIMQLLVKILYDPSRKYASYQQRNIINLKPNSELRILITIHKPNHISPSIDFLDVCHPTTEHPIVVDALHLVELVGQSLPIFTSHALQRQSSSASSHRSYSDNVILAFDIFQHNNQNATSVFTYTAISPPDLMYENVCTLALDKLASMIVLPFHQRWSSDGGIESDDKNLRALNCKVLETAPCTVGIHICRASHPRKDSCTKLAMIYLGGTDDQEALCLAKRAIVNPNIRMVVYHLVVKHHAAELEDLMVMEDYLLQEVKHAHNVAYKEVFVKDGSDTTAFLRDVVKEHEFFIVGRRHEINAPQTMGLTDWSEFPELGVIADVLSSPDFKSDASVLVVQQQLSRKKSTKRLIF* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0741 788 Pfam Sodium/hydrogen exchanger family 59 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g0741 788 PANTHER CATION/H+ EXCHANGER 3 12 782 - -
Lja6g0741 788 Gene3D - 53 454 IPR038770 -
Lja6g0741 788 PANTHER CATION/H + ANTIPORTER 12 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0741 Lja-Chr6 16230838 16246292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0741 23 776 Antiporter Super Family AT5G22900 36.218 1.63e-154 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0741 - - lja:Lj0g3v0332259.1 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1020 6 23640784 23647073 Lja6g0741 6 16230838 16246292 PCT