Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0731 ATGAGAATAATGTTGCCTGTTTGCTCAGCCACACCGTGCTATTCCTCATCTTCCCAGATTCCTTTATTTGGGGGACTGCAACCCCTGTGCCCAGTTAGAAAGGATATTGAGAACAGATGTGTGGCAGAAGAAGGTGTGTTTCTGGGTTTGCAAAATGGAACACATTCACGGAGATATTCATTTACAGCACAAGCTATGAAAGCTGTTTCGGGTAGTTTTGTCTCTCAAAGTGAACAAGGATACCTTACAGATACATGGGGCCATTTACAACAAGTGGGAACCGATCCGCATTATTCACTGAGTGATGTTGGAGAACTCAAATACATAGAAAGATATAATTTATCTACTGTGCCAGAGGAGACTCTAGACTTTGCAAAAGAATCAACTGAAGGATTCAGCACATTAGTTGTACCGGCACAACCAGAGAATTTTGCATCACTGCCTAGTTCAATTAGCGCGGACAATGAATCGTTGGCCAGTACAAAAGCAAGTGTTGGTGACCTTGTGGCTGGAATCAATGAGTCATTCAATGCATCGGTTAATAAGGGAGAAAATGCTTTGCGAAGTTCGCTGGATACAGCCACTTCTTTTATAGATTCTATTGTAAATAATGCCACGAAATCTGCAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAATCAGGGGAGGTAGCAAATAAGAAGTTTACAAGCTTTTCAAGTGACCTCAGTGGAGTCACAAATAAAGCACCTGCTTTGGCTGTTGATGCATTGCGCCGTGCAATCATAGCAGCAGAGAGTTCTCTAGCAAGTGGAGCTTCCTACGTTGTTTACCTCTACGGGTCAGCTAAGGAGCTCCTTCCTGCAGGGATTAGGGATACAGTCAATGTATATGAAGACAAAGCAACAGAGATCTTGAGGCCTGTTGGGTCTGCAACTCAAAAGATATACTTGGCTTTCTACTCACTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATTATTCCATTTGTTGTTTTTGTCGGCTCTTCAGCAACATTATGGGTTGTTTACTGGTTGTCGACATACGGAGGTTACTCAGGAGATTTATCCCCTCAATCAGCTTTGGAGCTTCTGGCTGGGGACAAAAATGCCGCACTTATAGATGTCCGCCCCGAGGATTTGCGTGAAAAAGATGGTATTCCTGATCTTCGGCGGGCTGCTCGTTTTCGATATGCAAGTGTTACTCCACTTGAGGTTGATGGCTCCACGCGCAAGTTGTTGAAGAGTGGTAGAGACCTGGATGATTCCTTGATTGCTGCGATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAAGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAAGCATTGCAAGATCCTTGAGGCAATTTGGGGTCAAGAATACGTACTTGGTTCAAGGTGGCTTTCAGTCTTGGAAAAAACAAAGTCTCCGCGTCAAGGAACTTAAACCTGAGACAGCACTTTCCATCCTCAATGAGGAAGCTGAAGCAATTCTAGAGGATATTCGTCCGTCTCCCTGGCAACTTTTAGGTTATGGTACGGCTCTTACTGTGGGGTTGTATGCATTGTCAGAGTGGGAGAAGACATTACAGTTGATTGGTGTGTTTGGCCTCAGTTTGACCATCTATCTGCGGCTTTCTTCGTATGAAAAATCGGAAGATTTGAATCAAGATGTGAGGCTGTTGCTTGCTCCTGTTAAACGTGGAGCTCAAGCTTTTTCATGGGCTGCTGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCATTAGATGTTCAAAACCGGGTATTGCAGGCTGCTGCTAAACATGAATCCCAACCATCTGATAGCGAAGGTAACCAAGATCCAGTTCCTGATCAGACAGTTCCTCTCAATCCCAATGTATGA 1920 0.437 MRIMLPVCSATPCYSSSSQIPLFGGLQPLCPVRKDIENRCVAEEGVFLGLQNGTHSRRYSFTAQAMKAVSGSFVSQSEQGYLTDTWGHLQQVGTDPHYSLSDVGELKYIERYNLSTVPEETLDFAKESTEGFSTLVVPAQPENFASLPSSISADNESLASTKASVGDLVAGINESFNASVNKGENALRSSLDTATSFIDSIVNNATKSADNAFSKAFSAVDQSGEVANKKFTSFSSDLSGVTNKAPALAVDALRRAIIAAESSLASGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQKIYLAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWVVYWLSTYGGYSGDLSPQSALELLAGDKNAALIDVRPEDLREKDGIPDLRRAARFRYASVTPLEVDGSTRKLLKSGRDLDDSLIAAIIRNLKIVKDSSKVIVLDADGTRSKSIARSLRQFGVKNTYLVQGGFQSWKKQSLRVKELKPETALSILNEEAEAILEDIRPSPWQLLGYGTALTVGLYALSEWEKTLQLIGVFGLSLTIYLRLSSYEKSEDLNQDVRLLLAPVKRGAQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPVPDQTVPLNPNV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0731 639 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 343 486 IPR036873 -
Lja6g0731 639 Pfam Rhodanese-like domain 362 481 IPR001763 -
Lja6g0731 639 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 4 638 - -
Lja6g0731 639 Gene3D - 355 494 IPR036873 -
Lja6g0731 639 CDD RHOD 365 480 - -
Lja6g0731 639 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 4 638 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lja6g0731 639 SMART rhod_4 360 485 IPR001763 -
Lja6g0731 639 ProSiteProfiles Rhodanese domain profile. 370 488 IPR001763 -
Lja6g0731 639 MobiDBLite consensus disorder prediction 609 639 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0731 332 449 Sulfurtransferasese or Rhodanese AT5G23060 29.365 6.68e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0731 - - lja:Lj0g3v0313259.2 1098.96