Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0711 ATGAAAACCCTACTTTCTCTCTCTACCCTCCTCCTATGGTTCTCTCTCCTCTCCCCCACCACCACCGCAGACGACGGCGCGTTCATGTCAAACCTTGCAAAAGCGCTGACTCCAACTCCCTCAGGGTGGTCGTCGTCGAGCTCATTCTGCGACTGGTCCGGCGTGAAATGCGACTCCGGCCGCGTCACCGTCATCGACCTCCGCTCCAACTCACTCACCGGAACACTCCCTACCGATCTGAACTCGCTCACTCAGCTCAACACGCTCTCTCTCAGAAACAATCTCCTCACCGGCGCGTTTCCCTCACTCGCCAACCTCACACTCCTCAAAACTGTTTACCTCGACACCAACAACTTCACCTCCGTCCCTGATGGTTGCTTCTTCGGTCTCACGAGCTTGCAGCAGCTCAGCATGACCGACAACATCAACCTCAAGCCATGGACGATTCCTGCTGAGTTGACTCAGTCCACCAACCTCGTTGAACTGGATCTCGGAAATGCCAACCTCGTTGGTTCGTTACCGGACATTTTCAGCTCCTTGGTCAGCTTGCAGAGTCTCCGCCTCTCCTACAACAACCTCACCGGCGAGTTGCCGCAATCGTTATCCGGATCCGGGGTTCAGTTCGTGTGGCTCAACAACCAGAACGATGGGTTTGGGTTTACTGGTTCGATTGACGTGCTTGGTTCAATGACCCATTTGACTCAGGTGTGGCTACAGAAGAATCAGTTCACTGGTGCGATTCCTGATCTCACGAACTGCACTGGTTTGTTTGATCTGCAGCTCCGGGATAACAAGCTGACAGGTGTGGTTCCGTCTTCGTTGATGGGTCTTGCTAGCTTGAAGAATGTTTCGTTGGATAACAACAAGCTTCAGGGTCCTTTTCCTTCGTTTGGGAAAGGAGTGAAGAACACTCTTGATGGGATTAACAGCTTCTGTCAATCTAGTCCTGGACCTTGTGACCCACGGGTTACGACTTTGCTTGATGTTGCTGCGGGTTTTGGGTATCCGTATCGGTTGGCGAGTTCATGGGGTGGGAATGATCCTTGTAAGGATTGGAGCTTTGTGGTGTGTGCTGGGGGGAAGATTGTTACGGTGAATTTGGAGAAGCAGAACTTGACAGGGATTATTTCACCTGCATTTGCCAAGTTAACTGATCTGAGGAAATTGTATCTTGGTGGTAACAATTTGAGTGGCTCCATACCTGGAAGCTTGACGGGTTTAGCTCAGCTCGAGGTTCTGGATGTGTCTGATAACAATCTCTCTGGAGAGATTCCCGAGTTCCCGGGTGACAAGGTGAAGTTCAATTATGCAGGGAATGTTTTGCTTAGGAGTTCTGGAGGCAGTGGTGGTGGTGCAGGCGGTGGAACCACTCCCTCCGCTGATGCACCAAGTGGAAGTCGGTCTGGAAAGGCAAGTGGGTCTTCCCTCTCACCGGCGTGGATCGCGGGTATTGCCATTATTGCAGTGTTCTTTGTTGCGGTTGTGTTGTTTGTGTTTTGTAAGTGTTATGCCAGAAACCGGCATGGGAAATTCGGTAGGGTTGATAATCTTGAAAATGGAAAAGGCAACGTGAAAATTGATATGGTGAGTGTCTCGAATTCCAATGGATATGGCGGAGGTGGGGTTGCGAGTGAGTTACAGAGCCAGGCCAGTGAGCCTAGTGACCGTCAATTTTTTGAGGGTGGAAATGTTACTATTTCAATCCAAGTTCTCCGGCAAGTTACCGATAATTTCAGCCAAGATAACATTTTAGGGAGGGGAGGATTTGGAGTTGTTTATAAAGGGGAATTGCATGACGGAACTCAAATTGCTGTGAAGAGGATGGAATCTGGTCCAATGGGAAGTAAGGGAATGAATGAGTTCCAAGCAGAGATTGCGGTGCTGACTAAAGTTAGGCATAGACATTTGGTTGCTCTGTTAGGATACTGCGTGAATGGCAATGAAAGGCTTTTGGTGTATGAGTACATGCCACAAGGGACTTTAACACAACATCTGTTTGATTGGGGTGAAAATGGCTGTGCTCCTTTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTTGCAAGGGGAGTGGAATACTTGCACAGCTTAGCTCAGCAGAGCTTCATTCACAGGGACTTGAAGCCCTCAAACATCCTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGAAAGTATTCGGTCGAGACACGTTTAGCTGGAACATTTGGATATCTGGCACCTGAATATGCAGCTACGGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTCGGAGTAGTTCTGATGGAACTAATCACTGGTAGAAAGGCATTGGATGATACTGTGCCTGATGAAAGGTCACACCTGGTTTCATGGTTCCGAAGGGTGCTAGTTAACAAGGAGAACATCCCTAAGGCAATTGATCAAACACTGAACCCGGATGAAGAAACCATGGAGAGCATATACAAAGTGGCTGAGCTAGCAGGCCATTGCACTGCTCGGGAACCATACCAAAGGCCAGATATGGGTCATGCAGTGAATGTCCTGGTTCCTATGGTAGAGCAATGGAAGCCTACAAGCCATGAAGAAGAAGAAGGTGATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGAGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGATGACATGTCCTTCTCACAAACTCAATCTAGCATTCCTGCTAAACCTTCAGGATTTTCAGACTCCTTTGATTCACTGGATTGCCGGTAA 2781 0.4865 MKTLLSLSTLLLWFSLLSPTTTADDGAFMSNLAKALTPTPSGWSSSSSFCDWSGVKCDSGRVTVIDLRSNSLTGTLPTDLNSLTQLNTLSLRNNLLTGAFPSLANLTLLKTVYLDTNNFTSVPDGCFFGLTSLQQLSMTDNINLKPWTIPAELTQSTNLVELDLGNANLVGSLPDIFSSLVSLQSLRLSYNNLTGELPQSLSGSGVQFVWLNNQNDGFGFTGSIDVLGSMTHLTQVWLQKNQFTGAIPDLTNCTGLFDLQLRDNKLTGVVPSSLMGLASLKNVSLDNNKLQGPFPSFGKGVKNTLDGINSFCQSSPGPCDPRVTTLLDVAAGFGYPYRLASSWGGNDPCKDWSFVVCAGGKIVTVNLEKQNLTGIISPAFAKLTDLRKLYLGGNNLSGSIPGSLTGLAQLEVLDVSDNNLSGEIPEFPGDKVKFNYAGNVLLRSSGGSGGGAGGGTTPSADAPSGSRSGKASGSSLSPAWIAGIAIIAVFFVAVVLFVFCKCYARNRHGKFGRVDNLENGKGNVKIDMVSVSNSNGYGGGGVASELQSQASEPSDRQFFEGGNVTISIQVLRQVTDNFSQDNILGRGGFGVVYKGELHDGTQIAVKRMESGPMGSKGMNEFQAEIAVLTKVRHRHLVALLGYCVNGNERLLVYEYMPQGTLTQHLFDWGENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRRVLVNKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPMVEQWKPTSHEEEEGDGIDLHMSLPQALRRWQANEGTSTMFDDMSFSQTQSSIPAKPSGFSDSFDSLDCR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0711 926 Gene3D Ribonuclease Inhibitor 25 315 IPR032675 -
Lja6g0711 926 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0711 926 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0711 926 SUPERFAMILY Protein kinase-like (PK-like) 554 854 IPR011009 -
Lja6g0711 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Lja6g0711 926 Gene3D Transferase(Phosphotransferase) domain 1 656 877 - -
Lja6g0711 926 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 10 926 - -
Lja6g0711 926 CDD STKc_IRAK 584 854 - -
Lja6g0711 926 SMART LRR_typ_2 383 406 IPR003591 -
Lja6g0711 926 SMART LRR_typ_2 106 129 IPR003591 -
Lja6g0711 926 SMART LRR_typ_2 83 102 IPR003591 -
Lja6g0711 926 SMART LRR_typ_2 180 204 IPR003591 -
Lja6g0711 926 SMART LRR_typ_2 407 431 IPR003591 -
Lja6g0711 926 MobiDBLite consensus disorder prediction 903 926 - -
Lja6g0711 926 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Lja6g0711 926 Gene3D Ribonuclease Inhibitor 321 442 IPR032675 -
Lja6g0711 926 Gene3D Phosphorylase Kinase; domain 1 540 655 - -
Lja6g0711 926 Pfam Leucine rich repeat 364 420 IPR001611 GO:0005515
Lja6g0711 926 Pfam Protein tyrosine and serine/threonine kinase 581 852 IPR001245 GO:0004672|GO:0006468
Lja6g0711 926 SUPERFAMILY L domain-like 43 427 - -
Lja6g0711 926 MobiDBLite consensus disorder prediction 447 469 - -
Lja6g0711 926 Pfam Leucine rich repeat N-terminal domain 25 58 IPR013210 -
Lja6g0711 926 Pfam Leucine rich repeat N-terminal domain 324 357 IPR013210 -
Lja6g0711 926 Pfam Leucine Rich Repeat 182 202 IPR001611 GO:0005515
Lja6g0711 926 PANTHER OSJNBA0070M12.3 PROTEIN 10 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0711 Lja-Chr6 15750730 15754820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0711 62 854 Receptor kinase-like Gene Family AT5G07280 33.822 1.01e-96 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lja6g0711 PK_Tyr_Ser-Thr 9.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0711 - - lja:Lj0g3v0075369.1 1567.75