Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0705 ATGGACAGTGACATGTCCGGGTGGGTCATTGAGTTTCTCCTCCGGAGCTCCGTACCCGATTCCACCATCCAGAAAACCCTCGCCGCCCTCCCACTCTCCGGCGCCGATCCCCGCCTCAAGAAAACCCTCCTCCTCCGCACCCTCCATTCCCACCTCATCAACGCTTCCCTCTCCGAAACCGCCCTCGAGATTCTCGAACTCCTCGAACAACTCCACCTCAACGACGCCGTACCCGTCCCGGACTCCTTGCGCCGCGCCTACTGCGCCGTCGCCGTTGAGTGCACCGTTAAGTACCTCGCCGCCTCCCCCGATGACCCCTCCGGCGAGTACTTCTCCGCCGTCCGCCGGATCTGGCGCGGCCGTGTTGCTGCATTGTCGGAGGCAGGTCGCGCTAGCGGGCTGGTCTCCGATGATTTGGAGCGGTGGAGGGATGATGTCGAGGCCGCGCTGTGGGATCCTAGGGTTTCTGAGAGGATTGCGGGGCTGAACACGAGGTGGGTCGCGATGGTTGAGGTCAGGGGGTACCTGAAGGAAGCATGGGAGATCATGGGTGCTTCGTTTCTCGACTTGATGGCGACGGGGTCGAAGGGGAAGGGTTTGTGCCTTGGAGGTGTTTGTGAAAATGATTCTGTGAGAAAGCGTGGTGATGGTGGGTTAGAGTGTTCGGCGAAGCGTGCTGATAGCCTTGAAGGTGTTTGTGAAAATGATTCTGTGAGGAAGTGTGGTGATGGAGGGATAGAGTGTTCCGCGAAGCGTGCTAATAGGAATGAAATCGATGATAATGATGGTTTGTGCCTTGATGGTGTTTGTGAAAATGATTCTGTGAGGAAGCGTGGTGGTGGTGGGTTAGAATGTTCTGCGAAGTGTGCTGATAGGAATGAAGTCGATGATAATGAGGGTTTGCGCCTTGAAGGTGCTTGTGAAAATGATTCTGTGAGGAAGCATGGTGATGGAGGGTTAGAGTGTTCGGGGAAGCGGGCTGATATGAATGAATTTGATGATAATGAGGGTTTGCACCTTGAAGGTGTTTGTGAAAATGATTCTGTGAGGAAGTGTGGTGGTGGTGGTGGGTTAGAATGTTCGGCGAAGCGGGCTGATAGGAGTGAATTCGATGATAATGAGGGTTTGTGCCTTGAAGGTGTTTGTGAAAATGATTCTGTGAGGAAGCATGGTGATGGAGGGTTAGAGTGTTCGGCGAAGCGTGCTGATAGGAATGAAGTCGATGGTAATGATGACAATGGCACTGATGATGGTGCATGCCGCATGGAGGGTGTGACCGTGACAGAGGAAAACCAGGGCAAGGAGCAATTTGAAGACACAGTTGATGTTCCTGCAAAGGGAAATCAAGTTCAGAAAGAAAACATTCAGCTCAAACGCAAGCAGTTTGTACTTCAAAAATGCCATAGGGGAGTTCAAATCTCTGGTGCTGAGGAAGTGGTACCAAAAAAATCGCGTAGCAACTGTGACCCCTTGCCTAGTGCTGAAGTTAAAAAAGTTCGAGAATCCCTTAGATCAAGTTCTTTGGAGCTACAAGCAGTGGTCACGGATCCTCTTCCTGATGCACTTCATGCTTCTGAAGTTGTAAGATCTCAATTGTCAATGAAAGATACAAAGCATGAGCCACATATTATTGAAAACCAAAGTGGAGATGCATATCTACCAGATCCAGATGCTTGCAGGAGTATTGTACCTTTTCTGCCTAATAATGCCGATCTTAGGAAGGAGTCTTCTGTACATTGCAGTAACGTTGATAGGCCCAACTTAATGGAGCGGAGAAGTAATGCTCAAACATATGAGTGGAATGATTCGATTGATAATTTGCCACAAGTAATACAGCCAAGAAGACGGAAATTGAAATGGACTTCATTGGAAGAGGAGACACTGAGGGCTGGTGTTAAAATGTTTGGAGGAGGAAACTGGAAAGCAATCCGAGATTTTTACAGTAACATATTTGAAAATAGAAGCGCAGTTGATCTCAAGGACAAGTGGCGAAACATGCTACGCTGA 2007 0.4973 MDSDMSGWVIEFLLRSSVPDSTIQKTLAALPLSGADPRLKKTLLLRTLHSHLINASLSETALEILELLEQLHLNDAVPVPDSLRRAYCAVAVECTVKYLAASPDDPSGEYFSAVRRIWRGRVAALSEAGRASGLVSDDLERWRDDVEAALWDPRVSERIAGLNTRWVAMVEVRGYLKEAWEIMGASFLDLMATGSKGKGLCLGGVCENDSVRKRGDGGLECSAKRADSLEGVCENDSVRKCGDGGIECSAKRANRNEIDDNDGLCLDGVCENDSVRKRGGGGLECSAKCADRNEVDDNEGLRLEGACENDSVRKHGDGGLECSGKRADMNEFDDNEGLHLEGVCENDSVRKCGGGGGLECSAKRADRSEFDDNEGLCLEGVCENDSVRKHGDGGLECSAKRADRNEVDGNDDNGTDDGACRMEGVTVTEENQGKEQFEDTVDVPAKGNQVQKENIQLKRKQFVLQKCHRGVQISGAEEVVPKKSRSNCDPLPSAEVKKVRESLRSSSLELQAVVTDPLPDALHASEVVRSQLSMKDTKHEPHIIENQSGDAYLPDPDACRSIVPFLPNNADLRKESSVHCSNVDRPNLMERRSNAQTYEWNDSIDNLPQVIQPRRRKLKWTSLEEETLRAGVKMFGGGNWKAIRDFYSNIFENRSAVDLKDKWRNMLR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0705 668 SMART sant 616 668 IPR001005 -
Lja6g0705 668 ProSiteProfiles Myb-like domain profile. 612 667 IPR001005 -
Lja6g0705 668 PANTHER MYB TRANSCRIPTION FACTOR 1 668 - -
Lja6g0705 668 Pfam Myb-like DNA-binding domain 618 667 IPR001005 -
Lja6g0705 668 SUPERFAMILY Homeodomain-like 613 668 IPR009057 -
Lja6g0705 668 PANTHER MYB TRANSCRIPTION FACTOR 1 668 - -
Lja6g0705 668 Gene3D - 620 668 - -
Lja6g0705 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 612 668 IPR017930 -
Lja6g0705 668 CDD SANT_TRF 619 668 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0705 620 667 Single Myb Histone (SMH) Gene Family AT1G15720 56.250 1.46e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lja6g0705 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0705 - K11111 lja:Lj0g3v0271999.1 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0705 6 15659967 15666604 Lja6g0705 6 15659967 15666604 ECH