Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0703 ATGGCCACAAAGATCCAAGATCCACATTCAAACCCCAATGCCACGACGGCGAACCCCTCCTCCACCTTATTCATCCGCGGCGGCGCCGGCGACTCGCATTCCCACCACCGCCGGTCCCACTCGGAGGTCAATTACAGGCTTCCGGACGACATGATGGGCCTCTCTCCGCCGGATCCGTTGAACGGCGGATCCTCAACGGCGAGCCTAGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAGAAGCTTGGAGGAGCCACGGACGGGTCGGGTCGAGGCGGAAATGGATCGGATCAGAGCGGTTACTGCAACGGCGTTGCCGGTACGAGCGGTCACAACGACGGAGAGAAGAGTCCGAGCGCCGCCGTGCAGAGGCCGAGGCATAGGCATAGTAGCTCCGTTGACTGTTCCACGTCGACGAGCATGTTTGGGGAGATCATGGAGGCGAAGAAGGCCATGCCTCCTGATAAGCTCGCCGAGCTATGGGCCATTGATCCAAAACGTGCCAAGAGAATACTTGCCAATCGGCAATCTGCTGCACGTTCCAAAGAGAGAAAGGCCCGCTATATGCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCTCAATTGACACTGTACCAGAGGGACACATCTGGTCTGAGTACTGAAAATACCGAGCTTAAGCTCCGGCTGCAGGCGATGGAGCAACAGGCACAGCTTCGTGACGCTCTTAATGACGCCTTGATGAAGGAAGTTGAGAGGCTTAAGGTTGCTACAGGGGAGGCGATGAACCCCTCTGAGTTGAATCTGGGAATGCACCAGATGCAATTTGCAGGGTCAAATTTCTTTTCAATGCCGCCACATTCAGGTCCTTCTGGTCATCATCAGAACTTACAGTTTCCTCCATTTGGTCACTCCCCGTCTAGTGCGCCAACCCATCAGATGCAACAAACAAATTCTCATCAAATCTCAGACATGTTGCAAAATGACCAGCTTGGTCGTTTTCAGGGACTTGACATTAGTAGCAAAGGATCAACGCTGGTGAAGTCTGAAGGCCCCTCAATATCTGCAAGTGAGAGTAGCACAACATTTTGA 1113 0.5364 MATKIQDPHSNPNATTANPSSTLFIRGGAGDSHSHHRRSHSEVNYRLPDDMMGLSPPDPLNGGSSTASLEEIGSEDDLFSTYIDVEKLGGATDGSGRGGNGSDQSGYCNGVAGTSGHNDGEKSPSAAVQRPRHRHSSSVDCSTSTSMFGEIMEAKKAMPPDKLAELWAIDPKRAKRILANRQSAARSKERKARYMQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTENTELKLRLQAMEQQAQLRDALNDALMKEVERLKVATGEAMNPSELNLGMHQMQFAGSNFFSMPPHSGPSGHHQNLQFPPFGHSPSSAPTHQMQQTNSHQISDMLQNDQLGRFQGLDISSKGSTLVKSEGPSISASESSTTF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0703 370 MobiDBLite consensus disorder prediction 30 45 - -
Lja6g0703 370 SUPERFAMILY Leucine zipper domain 172 223 IPR046347 GO:0003700|GO:0006355
Lja6g0703 370 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Lja6g0703 370 MobiDBLite consensus disorder prediction 91 143 - -
Lja6g0703 370 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Lja6g0703 370 CDD bZIP_plant_RF2 173 222 IPR044759 GO:0003700|GO:0006355
Lja6g0703 370 MobiDBLite consensus disorder prediction 291 327 - -
Lja6g0703 370 Pfam bZIP transcription factor 172 230 IPR004827 GO:0003700|GO:0006355
Lja6g0703 370 PANTHER BZIP TRANSCRIPTION FACTOR 1 367 - -
Lja6g0703 370 MobiDBLite consensus disorder prediction 350 370 - -
Lja6g0703 370 MobiDBLite consensus disorder prediction 97 122 - -
Lja6g0703 370 MobiDBLite consensus disorder prediction 1 68 - -
Lja6g0703 370 Gene3D - 172 222 - -
Lja6g0703 370 Coils Coil 188 215 - -
Lja6g0703 370 MobiDBLite consensus disorder prediction 1 27 - -
Lja6g0703 370 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0703 Lja-Chr6 15643987 15646815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0703 35 370 bZIP Transcription Factor Family AT2G40620 51.648 8.86e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja6g0703 bZIP_1 8.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0703 - - gmx:100775607 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0703 6 15643987 15646815 Lja6g0703 6 15643987 15646815 ECH
Lja6g0703 6 15643987 15646815 Lja6g0703 6 15643987 15646815 PCT