Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0702 ATGGTTGTGGCGGTGGGAACACCTTTCATTGTCTTATTATGTGTATTCACTTTGAGTTTAGCTTTTCTCCTCTCAAAACTTCTCTCAAAAGGTCAAACCAAAAATGTTCCAAAAGGGTCTCTAGGGTACCCTCTCATCGGTGAGACACTTAGTTTTCTTAAAGCACAGAGGCAAGACAAGGGCTCTGACTGGTTGGAAGAACGGGTATCAAAATATGGCAATGTCTTCAAAACATCCATAATGGGTTGCCCTACAGTGTTTGTCATTGGACAAGCAGGAAACAAGTTTGTCCTTGGTTCTCCAGAGGATGTTCTGTCTGCTAAGAAACCCTTCACCATTCAAAAGATACTTGGAAAGGAAAGCATAGTTGAACTCACAGGATCAAGGTTTAGGTTAGTCAAAGGGGAATTGGTGAAATTCATGAAAACTGAATGCCTCCAGAATTATGTCAAAAAGATGGATGAATTGGTGAAGACAGCATTATTGAGAGAATTGAAAGAGAATGAAACCACAACTGGAGTTGTGAGGTTCATGAAAAAGCTGGCCTATGAAATTGCATGCAATATATTGTTTGACATCAAGGATGAGCAAACTAGGGAGGTTTTGTTTAAAGATTTTATCATAGCATTTAAAGCAATGCACTCTCTTCCCATCAATTTGCCAGGTACCTCATTTTGGAGAGGCCAAAGAGCAAGGGCAAGAATTGTTGATAGGACACTTCAAATTATGAACATTAGAAGGGAGGAACTTGCAAAAGGAACTCTAAGCTCTACCAATGATATGCTTTCTGGCCTGCTTGCATTAAGGGATGAAAATCACCAACCTCTAGCTGATGACATAATCACTGACAATTTCATTCTTTTATTTGTTGCAAGCCATGACACTTCTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCCGAGGTTTACAAAAAAGTCTTAGAAGAACAAATGGAAATCATAAAGCAAAGGGAAGGAACAGAAGACAGGCTAACATGGGCAGAGATACAAAAGATGAAATACACTTGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCTCCTTTGTTTGGCACCTTTAGGCAAGCACTTAAAGATACTAGCTTCCAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCAGCATGTGGAACACACATGAACAATGAAATATTCAAGAATCCAAACAAATTTGATCCATCTCGGTTTGACAATCCACCCAAGCCAATCCCAAGTTTTTCATACCTTCCATTTGGTGGAGGGCTTCATTATTGCTTAGGAAATGAGTTTGCCAGGGTTGAGACATTGACTACCATTCACAACTTTGTAACGATGTGTGAATGGTCTCAAGTAAACCCTGAGGAAACCATTACTCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCCAAATGTAATTTGTCTTAA 1461 0.3984 MVVAVGTPFIVLLCVFTLSLAFLLSKLLSKGQTKNVPKGSLGYPLIGETLSFLKAQRQDKGSDWLEERVSKYGNVFKTSIMGCPTVFVIGQAGNKFVLGSPEDVLSAKKPFTIQKILGKESIVELTGSRFRLVKGELVKFMKTECLQNYVKKMDELVKTALLRELKENETTTGVVRFMKKLAYEIACNILFDIKDEQTREVLFKDFIIAFKAMHSLPINLPGTSFWRGQRARARIVDRTLQIMNIRREELAKGTLSSTNDMLSGLLALRDENHQPLADDIITDNFILLFVASHDTSATLMSLMIWKLSRDPEVYKKVLEEQMEIIKQREGTEDRLTWAEIQKMKYTWRVAQELMRMIPPLFGTFRQALKDTSFQGYDIPKGWQVYWAACGTHMNNEIFKNPNKFDPSRFDNPPKPIPSFSYLPFGGGLHYCLGNEFARVETLTTIHNFVTMCEWSQVNPEETITRQPMPYPSMGLPIKIKPKCNLS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0702 486 Gene3D Cytochrome P450 27 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PANTHER CYTOCHROME P450 26 9 480 - -
Lja6g0702 486 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 480 - -
Lja6g0702 486 Pfam Cytochrome P450 37 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0702 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Lja6g0702 486 SUPERFAMILY Cytochrome P450 34 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0702 Lja-Chr6 15634609 15637450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0702 11 457 Cytochrome P450 AT4G19230 33.186 9.37e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0702 - - gmx:100790209 792.727