Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0700 ATGTGTCACACCCCTGATTATTTCTGGTCATACCTTCAATCCCTTTGGTCTTCTTTATTTGTTATGATTTTTCTCTTCATGATTATCAAAGCCTTAACATCTCCCTTTATTGAGAAGCCCACAAAACACAACCTCCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTCCCTGAAATGCTTGCAAACAAGCCTGCACCTCAGTGGATACATAAGATGATGGAAGAAATGAACACTGAAATAGCATGTATCCGCCTTGGAAATGTCCATGTAATCCCTGTTACTTCCCCTGCCATTGCTCGTGAGTTCTTGAGAAAACATGATGCTAATTTTGCATCAAGACCAAAAACCATGGCTACTGAAGCCATAAGTAGTGGTTATTTGACCACAGCTGTTACTCCCTTTGGCGAACAATGGAAGAAAATGAAGAAAATCTTGGCCAACGAGTTGCTTTCTCCCCTGAAGCATCAATGGCTTCAGGACAAAAGGAATGAAGAAGCTGCTAACCTTGTGTTCTATGTCTTCAACAAAAGCAATTACAATGATCATGATCATGATCATGGCCTTGTGAATGTTAGAATTGCTTCACAACATTATTGTGCTAATGTGTTCAGGAAAATGGTTTTTAACACAAGGTACTTTGGGATGGGTAGGGAAGATGGAGGGCCTGGATTTGAGGAAACAGAACATGTGGATGCTGCTTTCGTGTTGCTCAAGTACATTTATGCGTTCTCTGTTTCTGATTATGTACCATGGCTAAATGGACTTGGCTTAGATGGCCATAAGAGCAAGGTGAAGAAAGCAATGAGGATTATGGAGAAGTATCATGATTTCATCATTGAAGAGAGGATCAAAAAGTGGAATGAAGGAACCAAGATTGTTAAAGAGGACATGCTGGATGTTCTGATCACACTCAAAGATGTCAATGGTGACCAATTATTGACATTGAAGGAAATCAAGGCGCAAATTATAGAATTGATGATGGCAGTGGTGGACAATCCATCAAATGCTGTTGAATGGGCACTAGCAGAAATGATAAACCAACCTGAGTTGCTTCAAAGAGCCACTGAAGAATTAGACAATGTGGTTGGAAAAGAGAGAATGGTCCAAGAATCAGACATCCCTAAACTCAAATTTCTGAAGGCTTGTGCAAGAGAATCTTTTCGCATGCATCCCATAGCACCTTTCAATGTCCCTTATGTCTCTATGAAAGACACAATGGTTGGAAATTACTTCATCCCAAAGGGTAGTCATGTGATTTTAAGCAGAAGTGGTCTTGGAAGAAACCCAAACGTTTGGAGTGAGCCCCACAAGTTCAAACCTGAACGTCATCTAAAAAGTGATGGGTCTGATGTAGTTTTGTCTGAGCCAGAATTGAAGTTCATTTCCTTTAGTACAGGAAGGCGTGGTTGTCCTGGGGTGAATCTTGGAACAACAATGACTATGGTGCTACTTGCTCGGTTACTCCATGCCTTTAATTGGAGTGCACCGTCCAATGTGTCTAGCATCAATCTTAATGAGTGCAAAAGTGAAATGTTTCTTGCTGAACCACTTTTGGCAATAGCAAAGCCAAGATTAGCCACAAAATTGTACCACCTATAA 1605 0.41 MCHTPDYFWSYLQSLWSSLFVMIFLFMIIKALTSPFIEKPTKHNLPPGPKPWPIVGNLPEMLANKPAPQWIHKMMEEMNTEIACIRLGNVHVIPVTSPAIAREFLRKHDANFASRPKTMATEAISSGYLTTAVTPFGEQWKKMKKILANELLSPLKHQWLQDKRNEEAANLVFYVFNKSNYNDHDHDHGLVNVRIASQHYCANVFRKMVFNTRYFGMGREDGGPGFEETEHVDAAFVLLKYIYAFSVSDYVPWLNGLGLDGHKSKVKKAMRIMEKYHDFIIEERIKKWNEGTKIVKEDMLDVLITLKDVNGDQLLTLKEIKAQIIELMMAVVDNPSNAVEWALAEMINQPELLQRATEELDNVVGKERMVQESDIPKLKFLKACARESFRMHPIAPFNVPYVSMKDTMVGNYFIPKGSHVILSRSGLGRNPNVWSEPHKFKPERHLKSDGSDVVLSEPELKFISFSTGRRGCPGVNLGTTMTMVLLARLLHAFNWSAPSNVSSINLNECKSEMFLAEPLLAIAKPRLATKLYHL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0700 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 532 - -
Lja6g0700 534 Gene3D Cytochrome P450 38 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 Pfam Cytochrome P450 46 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g0700 534 ProSitePatterns EF-hand calcium-binding domain. 308 320 IPR018247 -
Lja6g0700 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Lja6g0700 534 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 12 532 - -
Lja6g0700 534 SUPERFAMILY Cytochrome P450 46 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0700 Lja-Chr6 15625006 15627959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0700 20 532 Cytochrome P450 AT5G05260 52.713 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0700 - K14984 gmx:100809902 755.362