Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0689 ATGGCAGATGAAGCACAGGCTGACCTGAAAGAGGAGGTTCCCGAAATTGTTCCATTTGATCCTACTAAGAAGAAGAAGAAGAAGAAAATCACAATTGTAGATCCTGCTGATGATTCAGTGGACAAGCTGGCTGAGAAGACAGAAAATCTGTCAGTTTCTGAAGGGGTTGAGAGCACATTCACTGGTTTAAAAAAGAAGAAGAAGAAGCCGGTTGAAATGAGTGCCTTAAATGATGAAAGTGTAGATGCTGTTGAAGATTTGGATGGTCCCATTGAAGAAGATGAAGAAGATGCCATACCCTTGCAACCTCGTTATCCTTGGGAAGGCAGTGATCGTGATTATGAATACGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAGCTTGCTGGAGACAGACGGAGGACTGTTATGAGGCCTCCGCAAGTTCTACGTGAGGGAACCAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCCCTAGATGGACAGCAGAGGTTGGTAGTGAAGGGAAGATTTGCGCCAAAGAACTTTGAAGGAATCCTGCGGCGATACATCAATGAATATGTCATTTGCTTTGGATGCAAAAGTCCTGACACTATACTTTCTAAGGAGAACCGTTTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTGGCTCCAATCAAAGCTGGTTTTGTTGCGCGTGTTGGCCGTAGGAACGCCGGGACATGA 807 0.4486 MADEAQADLKEEVPEIVPFDPTKKKKKKKITIVDPADDSVDKLAEKTENLSVSEGVESTFTGLKKKKKKPVEMSALNDESVDAVEDLDGPIEEDEEDAIPLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0689 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Lja6g0689 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Lja6g0689 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
Lja6g0689 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
Lja6g0689 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Lja6g0689 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Lja6g0689 268 Gene3D - 111 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0689 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 76.779 3.52e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0689 K03238 - gmx:100783618 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0689 6 15440220 15448079 Lja6g0689 6 15440220 15448079 ECH