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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lja6g0687
ATGTCCGTACAATCAACACTGAAGCTCCACCATCCCAAACAATCCACTGCAAGTTCCCATTTTGAGGGTGACCCACCATGCAAATCCACCGCCAAAACCCAAAACCGGAAGAAGCTCCTCCGTATCATTCTCACCGACCACGACGCCACCGACTCTGACTCTGACTCTTCCGGCGACGATAAACCGCCACAAAACCCATCAAAGCCTCCAAGAGTGAAGAAGAAAATCACCCAAATCAACATGCATCTTCCTCCCTTCTCAGATTCCTCAACCCCATCACCTTCTCCTTCTTCATCTTCCAACCCTGACCCGACCCGTTTCAAGAGACCCAGAAAATCCCCTGCCCGTGTCTCTACCTCTCGCTGCCGGAGCAAATTTGTGGGAGTTCGCCAGAGACCCTGGGGCCGGTGGATCGCTGAGATCCGAGACCCGACCCGTTATGGGAAACGGGTCTGGCTCGGGACGTTCGACACGGCGGAGGAAGCCGCTGCTGCCTACGATGAAGCCGCCTTGAAGTTTAAGGGCCCTAATGCCGTCACCAACTTTGCGTCTCCGACGTCTGTTCTGGCCTACTACGACGGTGACTCGACGGCGTTTGACGGTTTCCGTCATGGCGCGGTGGATGCTTTCGGGTTCGATATCGACGCGCCGTTAAGTTTGACGGACGTTAACTCGGTGCTGACTAGTCAGCGGTTTGGGAAGGACGAGTTCAGCGAGTTGAACCCGGACGAGTTCTTGACCTGA
744
0.5524
MSVQSTLKLHHPKQSTASSHFEGDPPCKSTAKTQNRKKLLRIILTDHDATDSDSDSSGDDKPPQNPSKPPRVKKKITQINMHLPPFSDSSTPSPSPSSSSNPDPTRFKRPRKSPARVSTSRCRSKFVGVRQRPWGRWIAEIRDPTRYGKRVWLGTFDTAEEAAAAYDEAALKFKGPNAVTNFASPTSVLAYYDGDSTAFDGFRHGAVDAFGFDIDAPLSLTDVNSVLTSQRFGKDEFSELNPDEFLT*
248
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lja6g0687
247
MobiDBLite
consensus disorder prediction
1
121
-
-
Lja6g0687
247
CDD
AP2
124
183
IPR001471
GO:0003700|GO:0006355
Lja6g0687
247
MobiDBLite
consensus disorder prediction
82
104
-
-
Lja6g0687
247
MobiDBLite
consensus disorder prediction
1
33
-
-
Lja6g0687
247
ProSiteProfiles
AP2/ERF domain profile.
125
183
IPR001471
GO:0003700|GO:0006355
Lja6g0687
247
Pfam
AP2 domain
124
175
IPR001471
GO:0003700|GO:0006355
Lja6g0687
247
SMART
rav1_2
125
189
IPR001471
GO:0003700|GO:0006355
Lja6g0687
247
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE
16
187
-
-
Lja6g0687
247
MobiDBLite
consensus disorder prediction
39
58
-
-
Lja6g0687
247
PIRSF
PTI6
182
247
IPR017392
GO:0003700
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lja6g0687
Lja-Chr6
15396957
15398310
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lja6g0687
38
182
AP2-EREBP Transcription Factor Family
AT4G27950
41.611
8.72e-28
107
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Lja6g0687
AP2
4.5e-16
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lja6g0687
K13434
-
gmx:102660028
269.24
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lja6g0687
6
15396957
15398310
Lja6g0687
6
15396957
15398310
ECH
Lja6g0687
6
15396957
15398310
Lja6g0687
6
15396957
15398310
PCT
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