Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0681 ATGTATCTTTCAAAGGGTCACGTCATCTTGTGGTTCTGCTGGTATTTGCTACTGGCTGCTGCGCAGGATGCTATCACTGACCCAACTGAAGTTGAAGCATTAAAAAGGATAAAGGAAAGTTTGAATGATCCTAATAGAAATTTAAGTAATTGGAACCGTGGCGATCCATGTACATCTGGCTGGACTCGAGTTCTGTGCTTCAATGAAACATTAGTGGATGGCTATCTACATGTTCAAGAATTGCAACTAATGAATTTGAACTTGTCTGGAACTTTGGCACCAGATATTGGGAGCTTAGGTTATATGGAAATATTGAACTTCATGTGGAACAATTTAACTGGAAGCATTCCAAAGGAAATTGGGAATATCAAAACTCTAAAACTCTTGCTCCTGAATGGAAATCTATTAACAGGTCCACTGCCTGAAGAGCTTGGCTATCTTCCAAACCTTGATAGGATACAAATTGATCAGAATCATATATCAGGACCTGTACCTACATCTTTTGCAAACCTGAACAAGACAAAGCACTTTCACATGAACAATAACTCACTTAGCGGACAAATCCCTCCAGAACTTTCCAGATTACCAAACCTTGTTCATCTCCTTCTTGACAACAACAACTTATCAGGATACCTTCCCCCTGAGCTTTCCAAGTTGCCAAGCTTACTTATAATTCAACTTGATAACAATAACTTTGGCGGGAATACCATTCCAGATACTTATGGCAACATGTCAAAATTGTTGAAGTTGAGTCTCAGAAATTGTAACTTGAAAGGCCCAATTCCTGATTTAAGCAGGATACCTTCCCTTCTTTATCTGGACCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCCTAATAAGCTTTCTGAAAATATCACAACCATTGATTTATCGAACAACAAACTTACTGGAACAATTCCATCTTACTTTTCTAGTCTTTCAAATCTTCAGAAATTGTCACTTGCAAACAATTCATTGAATGGCACTGTTTCTTCCACCATTTGGCAGGACAAGAATTTCGACGCAGAAAGATTTCTCTTGGAATTGGAAAATAATAAATTTACATCCATATCTGGAAGTACTGTTCTCCCTCCAAATGTCACAGTCTTGCTTGATGGTAATCCTCTATGCTCAAATGAAACCCTGGGTCAGTTCTGTAGATCTGAAGGTGTTAATGACACAAATGGCCTATTTCCAGCAAACTCCAGTGACTCCTGTCGTGCTCAATCATGTCCACCTCCTTATGAATACTCTGTGGATTGTTTCTGCGCAGCCCCATTGCTCGTTGGTTATCGACTAAAAAGTCCTGGATTTTCAGATTTTCGTCCATACTTGAATGCATTTGAGAAATACCTGACTTCTGGTCTTAGTATATATACCAAGCAGTTAAACTTCACATTTCAGTGGCAATCGGGACCTCGACTGAGAATGAACTTGAAGATTTTTCCATTATATGTTGATAGAAATAGTTCTCATACTTTCAATAGAAGCGAGGTCCAAAGGATCAGAAGCATGTTTACAGGATGGAAAATTCCTGACAGTGATTTGTTTGGGCCTTATGAACTGAATAACTTCATTCTCCTGGATCCTTACAAGGATGTGGTTAGCGCCTCTTCAAAATCTGGGATAGGTACAGGTGCACTAGTTGGCATAATCCTAGGGTCAATTGCCTGTGCAGTGACGTTGTCTGCAATTGTTACTCTTCTTATATTAAGATTAAAAATGAGAAATTATCATCCAGTTTCCAACAGACGTCATGCATCTAGAATCTCAATAAAAATGGATGGCGTGAAGGCCTTTACTTATGGAGAATTATCCTCCGCTACAAACAATTTTAGCAGCTCTGCTCAAGTTGGACAAGGGGGATATGGGAAGGTTTACAAAGGTATTCTTTCTGATGGCACAGTTGCGGCCATTAAACGTGCACAAGAGGGATCACTGCAAGGTGAGAAGGAGTTCCTCACAGAAATATCATTACTGTCAAGGTTACATCATCGGAACCTTGTGTCTCTGTTGGGATACTGTGATGAAGAAGGGGAACAGATGCTAGTTTATGAATTTATGCCAAATGGCACGCTAAGGGATCACCTTTCTGCTTCATCAAAAGAACCTCTGAGTTTTTCCACGAGATTGAAGGTTGCACTAGGGTCAGCTAAAGGTCTTGCGTATCTACACACAGAAGCTGATCCTCCGATATTTCACCGCGATGTCAAGGCCACTAACATATTATTGGACTCTAGATTTTCGGCAAAGGTGGCTGATTTTGGACTTTCCCGGCTCGCCCCTGTTCCAGATTTAGAAGGAATTGTGCCTGGTCATGTATCTACAGTTGTAAAAGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTACTTTTGGAACTTTTGACCGGGATGCATCCTATCTCACATGGCAAGAATATTGTTAGAGAGGTTAATGTTGCCTACCAATCTGGTGTGATATTTTCAATTATTGATGAACGCATGGGATCTTATCCATCTGAGCATGTGGAGAAAATTTTGACTTTGGCCCTGAAGTGTTGTAACGACCAGCCAGATGCACGGCCTAAAATGGTAGAAGTGGTTAGAGAGCTTGAAAATATATGGTCTATGATGCCGGATTCAGATACCGGGGCAACTGGATCTATAACCAGTGATTCAAGCAAACCACTAAGCACACCATCTTCATCCTCTGCTATGAAGACTCCTTTTGTATCCGGCGATGTGTCCGGTAGTGACCTTATTAGTGGAGTGATACCAAGCATCAAGCCAAGATAA 2829 0.4065 MYLSKGHVILWFCWYLLLAAAQDAITDPTEVEALKRIKESLNDPNRNLSNWNRGDPCTSGWTRVLCFNETLVDGYLHVQELQLMNLNLSGTLAPDIGSLGYMEILNFMWNNLTGSIPKEIGNIKTLKLLLLNGNLLTGPLPEELGYLPNLDRIQIDQNHISGPVPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPNLVHLLLDNNNLSGYLPPELSKLPSLLIIQLDNNNFGGNTIPDTYGNMSKLLKLSLRNCNLKGPIPDLSRIPSLLYLDLSSNQLNESIPPNKLSENITTIDLSNNKLTGTIPSYFSSLSNLQKLSLANNSLNGTVSSTIWQDKNFDAERFLLELENNKFTSISGSTVLPPNVTVLLDGNPLCSNETLGQFCRSEGVNDTNGLFPANSSDSCRAQSCPPPYEYSVDCFCAAPLLVGYRLKSPGFSDFRPYLNAFEKYLTSGLSIYTKQLNFTFQWQSGPRLRMNLKIFPLYVDRNSSHTFNRSEVQRIRSMFTGWKIPDSDLFGPYELNNFILLDPYKDVVSASSKSGIGTGALVGIILGSIACAVTLSAIVTLLILRLKMRNYHPVSNRRHASRISIKMDGVKAFTYGELSSATNNFSSSAQVGQGGYGKVYKGILSDGTVAAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMPNGTLRDHLSASSKEPLSFSTRLKVALGSAKGLAYLHTEADPPIFHRDVKATNILLDSRFSAKVADFGLSRLAPVPDLEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMHPISHGKNIVREVNVAYQSGVIFSIIDERMGSYPSEHVEKILTLALKCCNDQPDARPKMVEVVRELENIWSMMPDSDTGATGSITSDSSKPLSTPSSSSAMKTPFVSGDVSGSDLISGVIPSIKPR* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0681 942 MobiDBLite consensus disorder prediction 890 922 - -
Lja6g0681 942 Gene3D Phosphorylase Kinase; domain 1 576 688 - -
Lja6g0681 942 Gene3D Ribonuclease Inhibitor 28 182 IPR032675 -
Lja6g0681 942 Gene3D Ribonuclease Inhibitor 183 286 IPR032675 -
Lja6g0681 942 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Lja6g0681 942 MobiDBLite consensus disorder prediction 889 942 - -
Lja6g0681 942 Gene3D Transferase(Phosphotransferase) domain 1 689 897 - -
Lja6g0681 942 SUPERFAMILY L domain-like 40 387 - -
Lja6g0681 942 Pfam Protein tyrosine and serine/threonine kinase 616 882 IPR001245 GO:0004672|GO:0006468
Lja6g0681 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Lja6g0681 942 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 918 - -
Lja6g0681 942 ProSiteProfiles Protein kinase domain profile. 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0681 942 SMART LRR_typ_2 195 219 IPR003591 -
Lja6g0681 942 SMART LRR_typ_2 267 291 IPR003591 -
Lja6g0681 942 SMART LRR_typ_2 314 338 IPR003591 -
Lja6g0681 942 SMART LRR_typ_2 147 170 IPR003591 -
Lja6g0681 942 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 918 - -
Lja6g0681 942 Gene3D Ribonuclease Inhibitor 287 397 IPR032675 -
Lja6g0681 942 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lja6g0681 942 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Lja6g0681 942 Pfam Leucine rich repeat 292 329 IPR001611 GO:0005515
Lja6g0681 942 SMART serkin_6 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0681 942 CDD STKc_IRAK 619 885 - -
Lja6g0681 942 SUPERFAMILY Protein kinase-like (PK-like) 598 895 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0681 Lja-Chr6 15332846 15342807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0681 13 894 Receptor kinase-like Gene Family AT5G01950 59.152 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lja6g0681 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0681 - - gmx:100786467 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0681 6 15332846 15342807 Lja6g0681 6 15332846 15342807 ECH
Lja6g0681 6 15332846 15342807 Lja6g0681 6 15332846 15342807 PCT