Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0656 ATGTCTAACCGAGTTTTCATGAAAAAGGGGCTGCTACCAGCATTGGGTGCCCACATTGTGAACTTGCTAAGCACAAGCAAACAACACTGCGGTGTTTCCATAGTGGTTCGATCGAAAACGACGTCTGCCCAGTACGTGGCTGCGAGAGCTCGAGATGCCACGTTTGAGAAGCTCATGGACAAGTACAAAAACCTTCTCAAAGTCATCGCGGTTCAAGACCTTATCCTCGCTAACCCCAAGAACCCATCAGTCTCTATTGATTTCCTCTCCAGGCTCTCCCAGAAGCTCCACCTCAACCGCGGAGCCACTGCCTTCCTCCGCAAGTATCCTCACATCTTCCACATTTACTATGAGCCCTCCAAGTTGCAACCCTATTGCAGGTTGACTGATGCTGCTCTTGATGTATCGCGGAAGGAAGCGGAGGCCATTAATGCTTCTATGCCAGTTGTTGTTGACAGACTTGTTCGGATACTGTCCATGTCTGCATCCAAAATGGTTCCACTTCGAGCTATTTTCAAGGTTTGGAGAGAGCTTGGCCTACCTGATGATTTTGAGGATTCGGTTATATCTGCTAATTCTAGTGTTTTTCAGCTGTGTGATGGGCATGAACTAAATACTCATTTGTTGAAGTTGGTTGGTGATCTTCCCAGTGATGGTTTTAGAGCGACTGTTGAGGATTGGAGGCTGGTTGAGTGCTGTAAGGAGGACAGCAGTGTTGATAGGATGGAAATGCGGTTCAGTTTCAAACATGGGTATCCTCCAGGGATGAGGTTGACCAAGACTTTCAGGGCCAATGTGAAGGAATGGCAGAGTTTGCCTTATGTGGGGCCTTATGAGGTGGTGAGTGAGAAGAAGAAGTCTAAGGCTGGGATGATGGCAATGGAGAAACGAGCGGTGGCAATTGTTCATGAATTCTTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAATTGGTTTGGGATTGATTTAAATATAAGGGATCTGTTCCTGGATCACCCAGGGATCTTCTATTTGTCAACTAAGGGGAAACGCCACACTGTTTTCCTGAGGGAAGCTTATGAGCGGGGTTGTTTGATCCAACCAAATCCTGTTTATGATGCAAGGAGAAAACTACTTGATCTTGTTCTTCTTGAACGTAGGGGTCTGCCTGCTCTTAATTCCAACTTGCAGGATAGAAGCAGTAACAATGAGGAGGACAATCAGCAAACACATGACTCTTTATCATCTTGA 1251 0.4628 MSNRVFMKKGLLPALGAHIVNLLSTSKQHCGVSIVVRSKTTSAQYVAARARDATFEKLMDKYKNLLKVIAVQDLILANPKNPSVSIDFLSRLSQKLHLNRGATAFLRKYPHIFHIYYEPSKLQPYCRLTDAALDVSRKEAEAINASMPVVVDRLVRILSMSASKMVPLRAIFKVWRELGLPDDFEDSVISANSSVFQLCDGHELNTHLLKLVGDLPSDGFRATVEDWRLVECCKEDSSVDRMEMRFSFKHGYPPGMRLTKTFRANVKEWQSLPYVGPYEVVSEKKKSKAGMMAMEKRAVAIVHEFLSLTVEKMVEVEKISQFRNWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIQPNPVYDARRKLLDLVLLERRGLPALNSNLQDRSSNNEEDNQQTHDSLSS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0656 416 PANTHER OS04G0618900 PROTEIN 23 412 - -
Lja6g0656 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 412 IPR045040 GO:0003723
Lja6g0656 416 MobiDBLite consensus disorder prediction 394 416 - -
Lja6g0656 416 Pfam Plant organelle RNA recognition domain 51 386 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0656 Lja-Chr6 15059239 15061928 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0656 - - mtr:MTR_3g063230 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0656 6 15059239 15061928 Lja5g1407 5 14075030 14078230 PCT