Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0631 ATGCAGATGCTGCAACTCAAGTTCTTACTGGCCATAACCTTGACATTGTGGTGGTGGAGCGACATCAATCATCACGGTGCAGTCGCGGCGCCGCAGACAAAGTTGCTGAACGCAGGGTGCAGCACGTACAACGCTTCTAACCTGCGCAGTTTCCATGCCAACATCAACGACACGTTTTCGGACCTGCGAGCGGAGATTAGGAACCAGAGCAACAACCACTTCGCGACGTCGCAGAAAGCAAGGGGGGAGGTGATTACCTTTACCATGCTTCAGTGCAGAAACTACCTCTCCAGAAAGGATTGCCTCGCTTGCTTCGACGCTGCTGATAAGAAAATCCGCAACTGCTCCGCCGCCAACGGTGCCAGAGTCATCTACGATGGCTGCTTCCTCAGGTACGAGAGCGAGAGGTTCTACGATCAAACCAATGAACAAGGTGGCGGTGTGTCATGTGGGAACAGGACTGCTGCAAAGGATGTTAGTGCTTTTGGAGCAGCTGGAATACAAGCGCTTATGGACCTCCAAATAGCAACACCAAAAATTAAAGGCTTTTATGCAGCTACTAAGACAATGTTAGCTCCTGGTGGTGGCGGCGGTGCAATCTATGCCGTTGCACAGTGCGTTGAGACAGCCACAGAGACCAACTGTCTCAGTTGCTTGACAGTTGGATTCAACAACTTGCAGACTTGTCTTCCCAAATCAGATGGCAGAGCATTTGATGCAGGGTGTTTTATGAGATACTCTGAGACACCCTTCTTTGCTGATAACCAGAGCATTGACATCAAACCCTATTTGAAAGAAGGAGGTTCAAGCAAGAAGTGGGTCATTATAGGTGGTGTTGTTGGAGGTGTAGCTCTTCTTCTGATCCTCCTTGCATTTTTCGCCTGGCGACGATTCAGAAAACCCAAGAGGGTTCCTAGGGGGAATATACTGGGAGCAACTGAGTTGAGAGGTCCAAGCAACTACAAGTATAGTGATTTGAAATCTGCAACAAAAAATTTCAGTGATGAAAATAAACTAGGAGAAGGAGGCTTTGGCGATGTCTACAAGGGTACTCTGAAAAATGGAAAAATAGTTGCAGTCAAGAAATTAGTTCTGGGCAAATCCAGCAAGATGGAGGATGACTTTGAAAGCGAAGTCAAGCTTATAAGCAATGTTCATCACAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAGGGGAAGAGAGAATCCTGGTTTATGAATACATGGAAAACAGCAGCCTTGACAAATTCTTATTTGGTGACAAAAAAGGCTCCCTCAACTGGAAACAAAGGTATGACATAATTTTAGGCACTGCAAGGGGACTGGCATATCTACATGAGGAGTTCCACATTTCCATCATACATAGAGATATAAAGACTAGCAATATTCTCCTGAGTGATGAGCTTCAGGCCAAAATTGCTGATTTTGGATTGGCACGCCTTCTGCCAGGGGATCAATCTCATCTCAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCAGAGTATGCAATTCATGGTCAATTATCAGAGAAAGCTGATACCTACAGCTTTGGTATCGTAGTCCTAGAAATCATAAGTGGTCGAAAGAGTACAGAAGTGAAGGTTGATGATGATGGTCATGAATACCTTCTTCAACGAACATGGAAACTGCATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGCTTTAGACCCTGATGAGTATGATGGAGAAGAAGTGAAGAAAACCATAGAGATTGCTTTGATGTGCACTCAAGCTTCAGCTGCAATGAGGCCAACCATGTCTGAAGTAGTAGTCCTGCTCCAAAGCAAGAGCTTAATGGATCACCTGCAACCAACTATGCCTGTGTTTGTTGATACGAATCTCAGGTCCCGTGACGGCCACTCTACCTCAACTGGTTCTTCTATGTCAAATGCCACTGCCTCATTTACTATTCCCTCAGCCAGATGA 1962 0.4592 MQMLQLKFLLAITLTLWWWSDINHHGAVAAPQTKLLNAGCSTYNASNLRSFHANINDTFSDLRAEIRNQSNNHFATSQKARGEVITFTMLQCRNYLSRKDCLACFDAADKKIRNCSAANGARVIYDGCFLRYESERFYDQTNEQGGGVSCGNRTAAKDVSAFGAAGIQALMDLQIATPKIKGFYAATKTMLAPGGGGGAIYAVAQCVETATETNCLSCLTVGFNNLQTCLPKSDGRAFDAGCFMRYSETPFFADNQSIDIKPYLKEGGSSKKWVIIGGVVGGVALLLILLAFFAWRRFRKPKRVPRGNILGATELRGPSNYKYSDLKSATKNFSDENKLGEGGFGDVYKGTLKNGKIVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGEERILVYEYMENSSLDKFLFGDKKGSLNWKQRYDIILGTARGLAYLHEEFHISIIHRDIKTSNILLSDELQAKIADFGLARLLPGDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSFGIVVLEIISGRKSTEVKVDDDGHEYLLQRTWKLHERGMHLELVDKALDPDEYDGEEVKKTIEIALMCTQASAAMRPTMSEVVVLLQSKSLMDHLQPTMPVFVDTNLRSRDGHSTSTGSSMSNATASFTIPSAR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0631 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 650 - -
Lja6g0631 653 CDD STKc_IRAK 339 606 - -
Lja6g0631 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Lja6g0631 653 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Lja6g0631 653 Pfam Protein kinase domain 334 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0631 653 MobiDBLite consensus disorder prediction 627 653 - -
Lja6g0631 653 SUPERFAMILY Protein kinase-like (PK-like) 316 605 IPR011009 -
Lja6g0631 653 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Lja6g0631 653 Gene3D Transferase(Phosphotransferase) domain 1 410 617 - -
Lja6g0631 653 ProSiteProfiles Protein kinase domain profile. 333 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0631 653 MobiDBLite consensus disorder prediction 625 653 - -
Lja6g0631 653 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Lja6g0631 653 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Lja6g0631 653 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Lja6g0631 653 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Lja6g0631 653 Gene3D - 32 137 IPR038408 -
Lja6g0631 653 Gene3D - 147 251 IPR038408 -
Lja6g0631 653 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 650 - -
Lja6g0631 653 SMART serkin_6 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0631 Lja-Chr6 14849258 14856333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0631 32 646 Receptor kinase-like Gene Family AT1G70520 36.465 1.31e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja6g0631 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0631 - - gmx:100793189 921.383