Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0590 ATGCCAGCCCGCGTTTTCCGATACGTGGCCCCCACCTCCCATGTGCTCAGTCTCTCTCAATTACTCACTCACTCACTCCACTCTCCTCCATGCCACCCCACACCACCTGTCTCCGCCACCACCCATCTCCATCTCCATCTCCATCTCTTCTTCTTCACTCTCCCCACACTCACCACCACCAGTACCACCACCACCATGATGACAACAACTCACTTCCCCATTCTCCTCTCCCTCTCCCTCTTCTTCTTCCTCCTCACCGTTCACTCCCAACCAACCTCACCAGACACCGCCGCAATGCTCGCTCTCCAAACCTCCCTCGACCCGCCGGAGTCTCTCGGCTGGTCCGGCCCGGACCCGTGTACATGGACCCGCGTCGTCTGTTCGGAGGAAAAACGGGTCACCCGGATCCAAATCGGTCGCCAGAGCCTCCATGGAACCCTCCCAAACAGCACCACTTTCCAAACGCTAACCGAGCTCGAACGCTTGGAGCTTCAGTTCAACAACATCTCGGGTCCTCTTCCAAGCCTCAACGGGTTAACCTCCCTGCAAGTTCTCATCCTCAGCAACAACCGCTTCACTTCCATCCCCGACGATTTCTTCGGCGGTCTCACTGAGCTTCAGTCGGTGGAGATCGACAACAACCCGTTCCAACGGTGGGAGATTCCCGAGAGCCTCCGTGACGCGTCGTCGCTGCAAAACTTCTCCGCCAACTCCGCCAACATCACCGGGAGAATCCCAGATTTCTTGGCGCTTCCGGGGTTGACCCATTTGCATTTAGCCTTCAATGGTCTTGAGGGTGTGCTTCCTTCGAGCTTTGGTTCGTTGCAGCTTCAGACTCTCTGGCTGAACGGGCAAGAGGATGGTGCTGACAGGCTTGGGGGCGCTGTTGATGTTTTGCAGAACATGACTTCTCTGACTCGGGTTTGGTTGCAATCCAATGCTTTTTCTGGGTCATTACCTGATTTCTCAGGTTTGCAAAGCTTGGAGGATTTGAGTTTGAGGGATAACTCTTTCACGGGTCCTGTTCCTGGTTCATTGGTGGGACTCAAGTCACTCAAATCTGTGAGCTTGACCAATAACATGTTTCAGGGGCCTGTGCCTGTGTTTGGTGCTGGGGTTAAGGTGGATTTGGAGGATGATTCGAATAGGTTTTGCTTGCCGGGTCCGGGTGATTGTGATAACAGGGTGAATGTTTTGCTTTCCATTGTTCAGTCTATGGGGGATCCTAAAAGGTTTGCGGATAATTGGAAGGGGAATAATCCATGTGCTGATTGGATTGGGATTACTTGTAAGGATGGTAACATTGCTATTGTTAATTTTCAGAAGATGGGTCTCACTGGCACTATATCACCCAAGTTTGCCTCACTTAAATCACTGCAAAGATTGGTGCTTGCTGAGAATAATCTCACCGGTTCGATTCCAGAGGAGCTTACCTCCCTGCCTGGGCTTGCTGAATTGAATGTTGCAAACAATCAGCTTTATGGAAAGATCCCTAGTTTTAAGAGCAATGTGATTGTTACCAGTAATGGTAACCCGGATATTGGGAAGGATAAGCCCAGCCCATCACCTAAAGGTCCATTGTCACCAAACTCGACAGCGCCGGACACAAGGGAAGAAAATGGTAGCAAAAAATCTAACCATGTTGGAGTAATTGTGCTTGCTGTGATTGGGGGTGTAGTGTTGATATTGGGGATTGGTTTGCTAGTTTTCTGCTTGCTTAGGATGAAGCAAAAACGGCTAAGCAGGGTTCAGAGCCCAAATGCACTGGTTGTTCACCCTCGTCATTCCGGATCAGATAATGAAAGTGTGAAGATAACAGTTGCAGGTTCAAGTATCACTGTTGGCGCTGTTAGTGAAACCCGTACAGTACCTAGCAGTGAGACAGGGGACATTCAGATGGTTGAAGCAGGAAACATGGTTATTTCTATACAAGTCCTGAGGAATGTCACAGACAATTTCAGCGAGAGAAACATATTGGGACAAGGAGGTTTTGGAACAGTCTATAAAGGTGAACTGCATGATGGTACCCAAATTGCAGTGAAAAGAATGGAGTCTGGGGCCATAACTGGGAAAGGTGCAACTGAGTTTAAGTCTGAAATTGCTGTTTTGACCAAGGTTCGCCACCGGCATCTTGTTTCTCTACTTGGCTACTGCTTGGATGGGAATGAGAAGCTTCTGGTGTATGAGTACATGCCTCAAGGGACGTTAAGTAGGCATCTCTTTGACTGGCTAGAATATGGATTGAAACCACTGGAGTGGAATAGAAGATTGACCATTGCCTTGGATGTGGCAAGGGCGGTTGAGTACCTTCACAGCTTGGCCCATCAAAGCTTTATACATAGGGACTTGAAGCCTTCAAACATTCTACTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGGCTTGTGCGTCTTGCTCCGGAAGGAAAAGCTTCAATAGAAACAAGAATTGCGGGAACTTTTGGATATTTGGCTCCAGAATATGCAGTTACTGGTCGCGTGACAACTAAAGTTGATGTATACAGCTTTGGGGTAATATTGATGGAACTGATAACTGGAAGAAGAGCAATTGATGAGACCCAACCGGAGGATAGTATGCACCTGGTAACATGGTTCCGTAGAATGTATGTAAATAAGGACTCATTTCCTAAGGCCATTGACAGCACAATAGAGCTCAATGAGGAAACACTTGCTAGTATTCACACCGTAGCGGAGTTAGCAAGCCACTGTTGTGCAAGAGAGCCATATCAAAGGCCCGACACGGGTCATGCTGTGAATGTGCTTTCTTCTCTTGTCGAGCTATGGAAACCATCGGAACACAGTTCTGAAGATATATATGGCATAGACCTAGACTTGTCCTTACCACAAGCACTAAAGAAGTGGCAGGCCTTTGAAGGTAGAAGCGAAATGGAATCTTCTTCTTCTTCACTCCTTCCGAGCTTGGATAACACTCAGACAAGCATTCCCCCGCGTCCATACGGGTTAGCCGATTCCTTTACATCAGCAGATGGGAGGTGA 3021 0.4856 MPARVFRYVAPTSHVLSLSQLLTHSLHSPPCHPTPPVSATTHLHLHLHLFFFTLPTLTTTSTTTTMMTTTHFPILLSLSLFFFLLTVHSQPTSPDTAAMLALQTSLDPPESLGWSGPDPCTWTRVVCSEEKRVTRIQIGRQSLHGTLPNSTTFQTLTELERLELQFNNISGPLPSLNGLTSLQVLILSNNRFTSIPDDFFGGLTELQSVEIDNNPFQRWEIPESLRDASSLQNFSANSANITGRIPDFLALPGLTHLHLAFNGLEGVLPSSFGSLQLQTLWLNGQEDGADRLGGAVDVLQNMTSLTRVWLQSNAFSGSLPDFSGLQSLEDLSLRDNSFTGPVPGSLVGLKSLKSVSLTNNMFQGPVPVFGAGVKVDLEDDSNRFCLPGPGDCDNRVNVLLSIVQSMGDPKRFADNWKGNNPCADWIGITCKDGNIAIVNFQKMGLTGTISPKFASLKSLQRLVLAENNLTGSIPEELTSLPGLAELNVANNQLYGKIPSFKSNVIVTSNGNPDIGKDKPSPSPKGPLSPNSTAPDTREENGSKKSNHVGVIVLAVIGGVVLILGIGLLVFCLLRMKQKRLSRVQSPNALVVHPRHSGSDNESVKITVAGSSITVGAVSETRTVPSSETGDIQMVEAGNMVISIQVLRNVTDNFSERNILGQGGFGTVYKGELHDGTQIAVKRMESGAITGKGATEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSRHLFDWLEYGLKPLEWNRRLTIALDVARAVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRRAIDETQPEDSMHLVTWFRRMYVNKDSFPKAIDSTIELNEETLASIHTVAELASHCCAREPYQRPDTGHAVNVLSSLVELWKPSEHSSEDIYGIDLDLSLPQALKKWQAFEGRSEMESSSSSLLPSLDNTQTSIPPRPYGLADSFTSADGR* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0590 1006 MobiDBLite consensus disorder prediction 508 543 - -
Lja6g0590 1006 ProSiteProfiles Protein kinase domain profile. 653 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0590 1006 ProSitePatterns Protein kinases ATP-binding region signature. 659 681 IPR017441 GO:0005524
Lja6g0590 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Lja6g0590 1006 SMART serkin_6 653 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0590 1006 Gene3D Ribonuclease Inhibitor 93 392 IPR032675 -
Lja6g0590 1006 SUPERFAMILY L domain-like 127 502 - -
Lja6g0590 1006 MobiDBLite consensus disorder prediction 972 992 - -
Lja6g0590 1006 ProSiteProfiles Leucine-rich repeat profile. 181 202 IPR001611 GO:0005515
Lja6g0590 1006 SUPERFAMILY Protein kinase-like (PK-like) 628 938 IPR011009 -
Lja6g0590 1006 CDD STKc_IRAK 659 932 - -
Lja6g0590 1006 Gene3D Phosphorylase Kinase; domain 1 613 730 - -
Lja6g0590 1006 MobiDBLite consensus disorder prediction 972 1006 - -
Lja6g0590 1006 Gene3D Transferase(Phosphotransferase) domain 1 731 949 - -
Lja6g0590 1006 PANTHER OSJNBA0070M12.3 PROTEIN 76 1006 - -
Lja6g0590 1006 Pfam Leucine rich repeat 453 493 IPR001611 GO:0005515
Lja6g0590 1006 Pfam Leucine rich repeat 181 233 IPR001611 GO:0005515
Lja6g0590 1006 Pfam Leucine rich repeat N-terminal domain 396 430 IPR013210 -
Lja6g0590 1006 Pfam Leucine rich repeat N-terminal domain 94 128 IPR013210 -
Lja6g0590 1006 Gene3D Ribonuclease Inhibitor 393 518 IPR032675 -
Lja6g0590 1006 SMART LRR_typ_2 156 178 IPR003591 -
Lja6g0590 1006 SMART LRR_typ_2 325 348 IPR003591 -
Lja6g0590 1006 SMART LRR_typ_2 456 480 IPR003591 -
Lja6g0590 1006 SMART LRR_typ_2 302 324 IPR003591 -
Lja6g0590 1006 SMART LRR_typ_2 179 202 IPR003591 -
Lja6g0590 1006 SMART LRR_typ_2 251 274 IPR003591 -
Lja6g0590 1006 PANTHER RECEPTOR PROTEIN KINASE TMK1 76 1006 - -
Lja6g0590 1006 Pfam Protein kinase domain 654 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0590 Lja-Chr6 14181094 14184990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0590 157 935 Receptor kinase-like Gene Family AT5G07280 31.975 1.08e-84 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lja6g0590 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0590 - K00924 aprc:113846741 1388.63