Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0585 ATGAGTGCTTCTTCATCCAAAAAAGTGGACAAGGGAGAGCAGGTGAATAAAGTCTGCAAGCCAAAATGGCTTGAGGATTTTTTAAGCAAAACTTTCTTTGACCCATGCTCAACTCATCAATTAAATAGGAATGAGTTGAACAAGTATTGCGTAGATTGCAAGCTGTCTATTTGTCAACATTGTGCATCATCAGAAACTCATCACCAACACAGGATGCTTAAAATCTACAGACACAGTTACAAAGATGTTGTCTCTCTTGATTCAATTGAAAAGTATATAGACTGCTCACAAATTCAGCCCTACAAATGCAATTCGCATATGATTATTTCTCTGAAGCCTCTTCCACACTTTGGTTCAGCAAAAAAGAGTGAAGAAACATGCCGCACCTGTAACAGGAAGTTGATGGAGCCTGACTTATATCGTTACTGCTCCATTTCATGCAAGGTTGAAGCTGTTTCAAGGAAGCCTAATGATTCAAATCCTCCATTTATTTTCACTCAGAGTCTTAATCAGGGAAAATATGTGGGAACTGTTAAACCCCCGACGCAGCGTAACAAAAGAAAGGGAACACCCTGCAGAGCTCCTCTCTTCTAA 594 0.3973 MSASSSKKVDKGEQVNKVCKPKWLEDFLSKTFFDPCSTHQLNRNELNKYCVDCKLSICQHCASSETHHQHRMLKIYRHSYKDVVSLDSIEKYIDCSQIQPYKCNSHMIISLKPLPHFGSAKKSEETCRTCNRKLMEPDLYRYCSISCKVEAVSRKPNDSNPPFIFTQSLNQGKYVGTVKPPTQRNKRKGTPCRAPLF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0585 197 ProSiteProfiles Zinc finger B-box type profile. 36 75 IPR000315 GO:0008270
Lja6g0585 197 SUPERFAMILY B-box zinc-binding domain 31 75 - -
Lja6g0585 197 Pfam B-box zinc finger 35 75 IPR000315 GO:0008270
Lja6g0585 197 CDD Bbox2 36 75 - -
Lja6g0585 197 Gene3D Classic Zinc Finger 35 83 - -
Lja6g0585 197 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 8 197 - -
Lja6g0585 197 Pfam PLATZ transcription factor 77 149 IPR006734 -
Lja6g0585 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 197 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja6g0585 PLATZ 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0585 - - zju:107416213 240.736