Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0576 ATGAACCCCCCTGCTGTACAAATCATTTCTGAATGCTTCATCAAGCCACAAAGACCCATTGAAGATTCAAACCATGTTTGCTATTTAACACCTTGGGATTTATCCATGTTGTCGTTACACTACATGCAATTTGGCCTACTCTTCAAGAAGCCCATATCATTTGTGAATCAACAAGATTTCATGAATAATCTGTTGGACAAGCTCAAACAATCTCTAGCTCTTGCACTTGTTCATTTCTATCCACTCGCTGGTCGCCTTGTTACGCAAAAAACCCAAGACCCTCCCTCTTATGCAGTTTTTATTGATTGCAGAAACAGTTCTGGTGCTAGATTTACGCATGCTACTTTAGACATGATTGTCTCTGATATCCTCTCCCCTATTGATGTCCCACCCATTGTTCACCCGTTCTTTGACCACCATAAAGCAATTAACCATGATGGTCACAATATGCCTTTGTTGTCAATCAAGGTAACTGAACTAGTAGATGGTGTTTTCATCGCTTGTTCCATGAACCATTGTGTTGCTGATGGGACTAGTTTTTGGAATTTCTTCAACACATGGTCTGAGATTTTTCAAGCTCAAGGGCATGAGCATGGATTTGATGTCCCCATTTCACGCCAACCCGTCCTTAATCGATGGTTTCCACAAGGTTGCGGTCCACTGATAAATCTCCCCTTGAAACATCGCGATCCTGAGTTTCTTTGCAGGTACGAAGCACCTAGGATGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCTATTGCAAAATTGAAAGAAGAGGTTAACGGAGAGTGGTCTTCGTTGTCGAATTCAGCAAAGATATCATCATTCCAAGCATTATCAGCATTTGTTTGGAGATCCATCACGCGTGTGCGCAACCTGCCGCGTGATAAGATAACGAAATGCAAGTTAGCTGCGAACAACCGATCTAGAATTGAACCACCTCTACCTGAAGAATACTTTGGAAACTCACTCAGCGCGATCATTGTTGAAGCGAAAGCGGGAGAACTGGTTGAGAATAATCTGGGATGGGCAGCACGGAAGCTTCATGTGGCTGTTGCAAACCATAACGATGGGGTGGTGCAGCAGTGGCTCAAAGATTGGTTACAGTCTCCTATAACCTATAAAGTGGATATGTTGCTGGAACCGACTGTTTGGATAGGTAATTCACCAAGGTTTAACGTATATGGGAATGAATTTGGAATGGGGAAGGCAGTGGCGGTTAGAAGCGGTTACGCAAACAAAAGTGATGGGAAAGTGTTCTCATATCCAGGTAGAGATGGAGGGGGCAGCATTGATTTGGAGGTCAATCTTTTGCCGGATATAATGGCTGCTCTTGAATCAGATGAGGAGTTCATGAATGTAGCTTCAGGGTGTAATCCCCTCTTCTAG 1392 0.4339 MNPPAVQIISECFIKPQRPIEDSNHVCYLTPWDLSMLSLHYMQFGLLFKKPISFVNQQDFMNNLLDKLKQSLALALVHFYPLAGRLVTQKTQDPPSYAVFIDCRNSSGARFTHATLDMIVSDILSPIDVPPIVHPFFDHHKAINHDGHNMPLLSIKVTELVDGVFIACSMNHCVADGTSFWNFFNTWSEIFQAQGHEHGFDVPISRQPVLNRWFPQGCGPLINLPLKHRDPEFLCRYEAPRMRERIFHFSAESIAKLKEEVNGEWSSLSNSAKISSFQALSAFVWRSITRVRNLPRDKITKCKLAANNRSRIEPPLPEEYFGNSLSAIIVEAKAGELVENNLGWAARKLHVAVANHNDGVVQQWLKDWLQSPITYKVDMLLEPTVWIGNSPRFNVYGNEFGMGKAVAVRSGYANKSDGKVFSYPGRDGGGSIDLEVNLLPDIMAALESDEEFMNVASGCNPLF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0576 463 Pfam Transferase family 6 453 - -
Lja6g0576 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 456 - -
Lja6g0576 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 456 - -
Lja6g0576 463 Gene3D - 5 220 IPR023213 -
Lja6g0576 463 Gene3D - 235 448 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0576 Lja-Chr6 13941367 13942758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0576 48 447 Monolignol Biosynthesis Gene Families AT5G48930 28.266 8.08e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0576 - - gmx:100792511 653.284