Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0557 ATGGCGCAACAAATGAAAGTTCACCAAGTTTGTTCGGTGGCGCCGCCGCAACAAGAAACCAGTACTCCATCCTCTTTTTCCCTCACATTCTTCGACATTCCATGGCTAAGAAGCCCTCCTGTGGAGCATCTTTTCTTCTACGAGTACCCCAACTCAACATCTTCCTTCTTTGACTTTGTTCTTCCCACTCTCAAACACTCCCTTTCACTCACCCTCCAACATTTCCTCCCTCTCGCTGGTAACATCATCTGGCCCCATGATTCCTCCAAACCAATCATAAACTATGTCCCTGGTGATGCTGTTTCCTTCACTGTAGCTGAATCCAATGCTGATTTCAACCATTTATCCTCCAACTTCTGTGAAGGTGAACAACGCCACCACCTCATATCTCGCCTCAACACGTCCCATGAAAGAGCCTCTGTTTTGGCATTCCAAGTCACTCTCTTCCCAAACTCTGGATTTGCCATTGGGATAACCACACACCATGCAGTCCTTGATGGCAAATCCTCCATGTTGTTCATCAAAGCATGGGCCTATGCTTGCTCTAACCTCAAAGATCAGCAGCACTCTTCATCAGTATCACTCCCTGAGAATCTAACACCTTTCTTTGACAGGTCAGTGATAAGAGACCCTTCAGAGATGGGCGAGGTGATGGAAATGATTGGTGGTGGTGCAGCACGGGAGGATGCGGTGAAAGGCTTGTTTGAGTTCACCCCTTTACATATCCAAAAGCTTAAGCAACATGCAAGGTTCAAGATTGAAAATAACAAGGTTCACTTGTCATCATTTTCGGTAGTGTGTGCTTATTTGCTGGCATGTGCAGTCAAGGCAGACCAACCAAAATGTAATAGAGTAGCTTGTGTGATTGGCATAGATTGTAGACACCGTTTAGAGCCTCCAATTAAGGCAACATATGTTGGTAATTGCATTGTTCCTCACATCGTTGAGGCTGAGACAGGGGAAGTGTTGGGTGATGATGGGTTCATCAATGCTCTTTTGAGGATAAGTGATGTGTTGAGTAGTTTGGAGGGTGGGGTTGTGAATGTAGCAGAGAATTGGATTTCAAAGTTTCAATCTGCGATGCGTTATAAGTTGTTTTCCATTACAGGATCACCTCGATTTGATGTTTATGGTGTTGACTTTGGATGGGGAAGGCCTAAGAAGGTAGATATGCCTTCTGCTGACAGAGCTGGATCGTTCTCTCTCTCTCGGCAAGTAGGGATCATGATGGAGGGATTGAGATTGGTTTAG 1251 0.454 MAQQMKVHQVCSVAPPQQETSTPSSFSLTFFDIPWLRSPPVEHLFFYEYPNSTSSFFDFVLPTLKHSLSLTLQHFLPLAGNIIWPHDSSKPIINYVPGDAVSFTVAESNADFNHLSSNFCEGEQRHHLISRLNTSHERASVLAFQVTLFPNSGFAIGITTHHAVLDGKSSMLFIKAWAYACSNLKDQQHSSSVSLPENLTPFFDRSVIRDPSEMGEVMEMIGGGAAREDAVKGLFEFTPLHIQKLKQHARFKIENNKVHLSSFSVVCAYLLACAVKADQPKCNRVACVIGIDCRHRLEPPIKATYVGNCIVPHIVEAETGEVLGDDGFINALLRISDVLSSLEGGVVNVAENWISKFQSAMRYKLFSITGSPRFDVYGVDFGWGRPKKVDMPSADRAGSFSLSRQVGIMMEGLRLV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0557 416 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 404 - -
Lja6g0557 416 SUPERFAMILY CoA-dependent acyltransferases 258 343 - -
Lja6g0557 416 Gene3D - 1 223 IPR023213 -
Lja6g0557 416 PANTHER - 3 404 - -
Lja6g0557 416 Pfam Transferase family 16 391 - -
Lja6g0557 416 Gene3D - 227 411 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0557 Lja-Chr6 13287416 13288723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0557 33 386 Monolignol Biosynthesis Gene Families AT5G48930 26.385 5.46e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0557 - - lja:Lj2g3v1090830.1 478.018