Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0554 ATGTCCACAGCCAGAGTTCACGTGTCGGCGCTCTCCGCCACCGTCAACCACCTCCGCCTCCGCCCAACCACCGCCGTTTCACCCAACTGCTTCAACACCCATTCCAGGAAGCCTCTCAGGGTGTCCATGTCTTCAGTTCCTCCTTCGGAACCCGTCGAAATCGCCGTTAAAGCTTCTCTCACCACACCCAACACCCTCGGCGACTGCCCCTTTTCCCAAAGGGTATTGTTGACACTGGAGGAAAAACATCTACCTTATGAGGCGAAGTTTGTGGATTTAAGCAACAAGCCAGAATGGTTCCTTCAAATCAGCCCCGAAGGTAAAGTTCCTGTGATAAAGTTTGATGAGAAGTGGGTTCCAGATTCAGATATTATCACACAAACATTGGAAGAGAAGTATCCTAGCCCACCATTGGTGACCCCGCCTGAAAAGTCTACAGTTGGATCAAAGATTTTTTCTACATTTATCGGATTTCTCAAGAGCAAAGATCCCAATGACGGAACAGAGCAAGCATTACTAAGTGAACTAAGCTCCTTCAATGATTACCTCAAGGACAATGGTCCTTTTGTCAATGGGAAAGACATATCTGCAGCAGACTTGTCACTTGGACCAAAGCTATACCATTTGGAAATTGCTTTGGGGCATTATAAGAAATGGACTGTACCAGATTCACTTACCTTTCTGAAATCTTATATGAAGGCTATTTTCTCAAGGGAATCATTCATTAAAACACGTGCACAACCACAGGATGTCGTTGAAGGTTGGCGTCCCAAAGTGGAAGGCTGA 786 0.4631 MSTARVHVSALSATVNHLRLRPTTAVSPNCFNTHSRKPLRVSMSSVPPSEPVEIAVKASLTTPNTLGDCPFSQRVLLTLEEKHLPYEAKFVDLSNKPEWFLQISPEGKVPVIKFDEKWVPDSDIITQTLEEKYPSPPLVTPPEKSTVGSKIFSTFIGFLKSKDPNDGTEQALLSELSSFNDYLKDNGPFVNGKDISAADLSLGPKLYHLEIALGHYKKWTVPDSLTFLKSYMKAIFSRESFIKTRAQPQDVVEGWRPKVEG* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0554 261 SFLD Main (cytGST) 68 234 - -
Lja6g0554 261 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 59 137 IPR004045 -
Lja6g0554 261 SUPERFAMILY Thioredoxin-like 67 135 IPR036249 -
Lja6g0554 261 Pfam Glutathione S-transferase, C-terminal domain 169 234 - -
Lja6g0554 261 SFLD Glutathione Transferase (cytosolic) 68 234 IPR040079 -
Lja6g0554 261 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 1 260 - -
Lja6g0554 261 SUPERFAMILY GST C-terminal domain-like 132 258 IPR036282 -
Lja6g0554 261 Pfam Glutathione S-transferase, N-terminal domain 68 137 IPR004045 -
Lja6g0554 261 Gene3D Glutaredoxin 51 138 - -
Lja6g0554 261 CDD GST_N_family 69 130 - -
Lja6g0554 261 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 260 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lja6g0554 261 Gene3D - 139 261 - -
Lja6g0554 261 CDD GST_C_DHAR 138 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0554 Lja-Chr6 13167483 13172541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0554 18 261 Glutathione S-transferase Gene Family AT5G16710 68.235 4.77e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0554 K21888 - gmx:732557 430.254