Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0553 ATGAAGAGAGATCACCAAGATAGCTGCAAAGGAGGGAACACTGGGAGTGTGAGGAACAGTGTTGGTGCTGTGAAAGGTGAATGCTCGTCAATGCCGACCGGCAAGGCCAAGATGTGGGAGGAAGAACACGGCGGCGCCGCCGGAGTTGATGAGCTTCTGGCGGCTTTAGGTTACAAGGTGCGTTCCTCTGACATGGCTGATGTTGCCCAGAAGATGGAACAGCTTGAGATGGTGATGGGTATTGCACAGGAAGATGGAATCTCACACCTTGCTTCTGATACCGTTCACTACGACCCTACCGATCTGTATTCATGGGTTCAAACCATACTCACCGAGCTCAACCCTCCTCCAACCACCACCACCACCTTGCTTGATCCATCTTCTCTCTTGGAAAATCACCAAATCAACGACCCTTTAAACCCTTCTTCAATTCTTCTCAACAACAACGCTTCAAGGGTCTTCAACGATGATTCTGAATACGATCTCAGAGCTATCCCCGGCATCGCCGCATACCCACCAACCCAAGACAACAGCAACGACGAAACCGAACCCAAGCGATTGAAGACATGGTCAATCAAATCTGATTCAGCTCTTTCACCGCCGGCGCAAGTTCCAGAGACGGCGAGGCCGGTGGTTCTGGTGGACACGCAGGAAACAGGGGTTCGTCTGGTTCACGCGCTGATGGCCTGCGCTGAAGCAGTTCAGAAGGAGAATCACAAGCTCGCGGACACGCTCGTGAAGCACATAGGGGTGGTCGCTGCGTCGCAAGCCGGCGCGATGAGGAAGGTTGCTTCCTATTTCGCACAAGCTCTTGCTCGGAGAATCTATGGAATCTTCCCTGACACCGTCGATTCCTCCCTCAACGACGTGCTTCACATGCACTTCTACGAGTCCTGTCCCTACCTGAAGTTCGCACACTTCACCGCCAACCAGGCCATTCTTGAGGCTTTCGCCACCGCCGGAAGAGTCCACGTCGTCGATTTCGGCCTGAAACAGGGGATGCAGTGGCCGGCGCTCATGCAGGCACTCGCATTGCGCCCCGGCGGACCACCCACTTTCCGCCTCACCGGAATCGGACCACCGCAGCCGGACAACTCCGACGCCTTGCAGCAGGTGGGTTGGAAGCTCGCTCAGCTTGCTCAAACCATCGGCGTCCAGTTCGAGTTCCGCGGCTTCGTCTGCAACAGCCTCGCCGATCTCGACCCGAACATGCTCGAGATCCGACCCGGGGAAGCCGTCGCTGTCAACTCAGTCTTCGAGCTCCACCGCATGTTAGCCCGACCCGGATCCATTGACAAGGTCATGGGCACAATCAAGAAGCTAAACCCCAAGATCGTGACCATCGTTGAACAGGAAGCGAACCACAACGGACCGGTTTTCGTGGACCGGTTCACGGAGGCGCTGCATTACTATTCAAGCCTGTTTGATTCTCTGGAAGGCGCGGCGTCAACCGGGTCGGATTCGTCGGGTCAGGACGTCGTGATGACCGAGGTTTACCTAGGGGAGCAGATATGCAACGTGGTGGCGTGCGAAGGGGTGGACCGGGTCGAGCGGCACGAGACCCTGGTCCAATGGAGGACCAGGATGGGCTCGGCCGGATTCAACCCGGTCCATCTCGGGTCGAACGCCTTCAAGCAAGCGAGCATGTTGCTCGCATTGTTTGCCGGCGGTGACGGTTACAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACTAGGCCACTCATTGCCACCTCCGCGTGGAAGCTTCCACAACCCAGTGAGTCGTAG 1779 0.5666 MKRDHQDSCKGGNTGSVRNSVGAVKGECSSMPTGKAKMWEEEHGGAAGVDELLAALGYKVRSSDMADVAQKMEQLEMVMGIAQEDGISHLASDTVHYDPTDLYSWVQTILTELNPPPTTTTTLLDPSSLLENHQINDPLNPSSILLNNNASRVFNDDSEYDLRAIPGIAAYPPTQDNSNDETEPKRLKTWSIKSDSALSPPAQVPETARPVVLVDTQETGVRLVHALMACAEAVQKENHKLADTLVKHIGVVAASQAGAMRKVASYFAQALARRIYGIFPDTVDSSLNDVLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNSDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIDKVMGTIKKLNPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGAASTGSDSSGQDVVMTEVYLGEQICNVVACEGVDRVERHETLVQWRTRMGSAGFNPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPQPSES* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0553 592 Pfam Transcriptional regulator DELLA protein N terminal 50 117 IPR021914 -
Lja6g0553 592 ProSiteProfiles GRAS family profile. 214 585 IPR005202 -
Lja6g0553 592 MobiDBLite consensus disorder prediction 1 31 - -
Lja6g0553 592 PANTHER DELLA PROTEIN GAI1-RELATED 29 586 IPR030006 GO:0003712|GO:0005634
Lja6g0553 592 Gene3D - 48 113 IPR038088 -
Lja6g0553 592 SMART DELLA_2 50 123 - -
Lja6g0553 592 Pfam GRAS domain family 223 585 IPR005202 -
Lja6g0553 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0553 Lja-Chr6 13102289 13104644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0553 1 586 GRAS Transcription Factor Family AT2G01570 59.121 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lja6g0553 GRAS 9e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0553 K14494 - gmx:100799695 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0553 6 13102289 13104644 Lja6g0553 6 13102289 13104644 PCT