Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0507 ATGCCCCTGTTTCTCCTCATTCGACCTCACTTCTCATGTTTTTCTTCTTTACTGACGACAACAACTGCTTTTGTGTCTTCTCATTTCCATCGACGGACCGTTTCTTACCGGCAGTCTTCCAATAACAGATTTGTTATTTCACACCTTTGTTTGGATCCAAAGATACAAGTTCTTGTCTGCAATTTTGTGATTAACGTAACCAAGAAAAATATGGAGGATAATGGATGTCAACCACTTGAAATAGATGAGTCAAAAGAAATTTTTGTTGGTCAAGTTGTGTATAGCCAAGAAGAAGCATATAATTTATACCAAGAACATGCTTTCAAATTGGGTTTTAGTGTAAGAAAAGGGAGGACGTTGTATCATGACAATGAGAAAAAGAATATACGTTTGAAAGACTTTTATTGTTCTAAACAAGGGTTTAAGAACAACGAACCTAGTGGTGAAGTAGCTTATGAAAGAGCAGATTCAAGAACAGATTGCAAAGCCATGGTGCGATTTAATGTGAGCAAGGATGGAGAATGGAAAATTACAAAGTTGGTAGTGGATCACAACCATGACTTTGTGCCACCTGAGCAAAGACATTTGTTACGCTCTATGAGAAAAGTGACAGAAGCTAAAGGAGGTATCGTAAAGTTGATGGTGAGTGCCGGTATAAAAGTTAAAAATATTTGGAGCTACTTAGGGGAAGAGGTTGGTGGGTATGATAAGGTAGGCATAACAATGAAAGATATGCATAATTATGTCTATGTTGAAAAGATGAAATCAATTGAAGCTGGAGATGCCCAATCTTTAGTGAATGAGTTGCAAAATAAGCAAGCACAAGATTCCATGTTCTACTATAGTGTGCAGTTAGATCAAGAATCACGTTTGACCAATGTCATTCACTAG 891 0.3715 MPLFLLIRPHFSCFSSLLTTTTAFVSSHFHRRTVSYRQSSNNRFVISHLCLDPKIQVLVCNFVINVTKKNMEDNGCQPLEIDESKEIFVGQVVYSQEEAYNLYQEHAFKLGFSVRKGRTLYHDNEKKNIRLKDFYCSKQGFKNNEPSGEVAYERADSRTDCKAMVRFNVSKDGEWKITKLVVDHNHDFVPPEQRHLLRSMRKVTEAKGGIVKLMVSAGIKVKNIWSYLGEEVGGYDKVGITMKDMHNYVYVEKMKSIEAGDAQSLVNELQNKQAQDSMFYYSVQLDQESRLTNVIH* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0507 296 PANTHER OS12G0160900 PROTEIN 74 294 - -
Lja6g0507 296 Pfam FAR1 DNA-binding domain 102 189 IPR004330 -
Lja6g0507 296 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 294 IPR031052 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja6g0507 FAR1 3.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0507 - - lja:Lj4g3v2120630.1 367.081