Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0503 ATGCTTCTTCTCTGGATCCTGATCCTTCTAGCCTCCAACTCTGTAAAATCTCATCAAGATGAGCTCTTCTTTGATGGATTCCATGGTGCTGCTGCTGCCACCAACATAAGCTTAAACGGCGTTGCAGCGATCGTGCAAAGAGGCTTACTTCGCCTGACAAACGACACTCAAAGAGTAGTCGGTCATGCCTTTTACTCAAACCCAATCAAGTTCAAGAACTCATCCTCCACCACCAACTCCAAAGTGTTATCCTTTTCCACTGCTTTTGCTTTTGCAATTATCCCCCAGTACCCAAAACTCGGTGGCCATGGCTTCGCCTTCACCATTTCTCCCTCCAAGGAGCTTCCAGGCGCGTATCCCAGCCAGTACTTAGGCCTCCTCAACCCGAACGACGTTGGGAACTTGTCGAACCACCTGTTCGCAGTGGAATTCGACACGGTCCAGGACTTTGAATTCGGCGACATCAACGACAACCACATTGGCATCAACCTTAACAGCATGACATCCAACAAATCAGTTAAAGCTGCGTTTTTCGCAGACGGATCAGCAAACAAACAAGACCTCTATTTGAAGAGTGGCAAGGTGATTCAAGCATGGATTGACTATGATTCCTCTAACAATCAATTAGAAGTTAGACTCTCCTCATCCTCTACAAAACCCAGATCCCCAATCTTATCCTACAATGTCAATCTCTCACCAATTCTCCAAGAAACCATGTACATAGGATTTTCTTCCTCAACAGGATTGCTAGCTAGCTCCCACTACATCTTGGGTTGGAGCTTCAAGATGAATGGAGAGGCCAAAACCCTCTCTTTACAAAACCTTCCCTCACTCTCTTCACCTAACAAAACTCAAAAAACCTTAACCTTAGGACTATGTTTCTCTGCTCTCATTCTAGTACTCGCCGCAATCAGTTTAGCATCATTCTACCTAATCAAAAAGTCGAAAAACACTGATGTGATCGAACCTTGGGAGCACAATGTTGGTCCACACAGATTCCCCTACAAAGAGCTAAAGAAAGCCACAAAAGGGTTCAAGGAGAAAAACCTCATCGGCTTCGGCGGATTCGGCAGGGTCTACAAAGGGTTGCTCCCAAAAACCACCACCGAAATCGCCGTGAAGCGAATCTCCCATGAATCAAAACAAGGGTGGCAAGAATTCGTATCAGAAATCACCACCATCGGAAAGCTTCGCCATAGAAACCTCGTTCAGCTACTGGGATGGTGCCGGAAGCAAAACGATCTCCTCCTAGTCTACGATTTCATGCCGAATGGGAGCTTGGACAAATACATATTCGATCAACCGAGAGTGATTCTGAGCTGGGAACAGAGATTCAGGATCATCAAAGGGGTGGCTTCGGGTCTCGTTTATCTGCATGAAGAGTGGGAGCAAACGGTGATTCACAGAGATATCAAAGCAGGGAACGTTCTGTTAGACGGTGAGATGAATGGGAAGCTCGGGGATTTTGGATTGGCGAAGCTATACGATCATGGCGCGAATCCTAGCACGACGAGGGTGGTGGGGACGTTGGGGTACCTGGCGCCGGAGCTCACGCGGACGGGGAAGCCGACGACGAGCTCCGACGTGTTTGCGTTTGGGGCGCTGCTGTTGGAGGTGGTGTGCGGGAGGAGGCCGATTGATCCGAAGGCGATGCCGGAGGAGCTTGTGCTGGTGGAGTGGGTTTGGGATCGGTGGCGCGTGGGGGCGGCGTTGGAGGTGGTGGATTCGAGGCTGGGTGGGGTTTTTGATGAGGCGGAGGCGGTGCTTGTGCTGAAGGTGGGGTTGCTGTGTTCCGATGAGGCGCCGGAGGGGAGGCCTGCCATGAGGCAGGTGGTGAGGTACTTGGAGGGGGAGGTGCCGGTGCCGGAGATTGGCGCGTTTGATGGGAAGAAAGGGGGTGGCGCCGCCGCGGTTGGCGGTGGTGGGATTGGTGATTTTGTGCATTCGTATACGGCGTCGTCGTTTTTTGATAGGGAGAATACGTGGTCGTCGTCGGTCGGTGATGACGTGGAGGTTGGTTCTGCATCGCCGCTTTCAATTTCCGGTGGCCGGGAGGAGGGTAGGTAG 2067 0.5119 MLLLWILILLASNSVKSHQDELFFDGFHGAAAATNISLNGVAAIVQRGLLRLTNDTQRVVGHAFYSNPIKFKNSSSTTNSKVLSFSTAFAFAIIPQYPKLGGHGFAFTISPSKELPGAYPSQYLGLLNPNDVGNLSNHLFAVEFDTVQDFEFGDINDNHIGINLNSMTSNKSVKAAFFADGSANKQDLYLKSGKVIQAWIDYDSSNNQLEVRLSSSSTKPRSPILSYNVNLSPILQETMYIGFSSSTGLLASSHYILGWSFKMNGEAKTLSLQNLPSLSSPNKTQKTLTLGLCFSALILVLAAISLASFYLIKKSKNTDVIEPWEHNVGPHRFPYKELKKATKGFKEKNLIGFGGFGRVYKGLLPKTTTEIAVKRISHESKQGWQEFVSEITTIGKLRHRNLVQLLGWCRKQNDLLLVYDFMPNGSLDKYIFDQPRVILSWEQRFRIIKGVASGLVYLHEEWEQTVIHRDIKAGNVLLDGEMNGKLGDFGLAKLYDHGANPSTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIDPKAMPEELVLVEWVWDRWRVGAALEVVDSRLGGVFDEAEAVLVLKVGLLCSDEAPEGRPAMRQVVRYLEGEVPVPEIGAFDGKKGGGAAAVGGGGIGDFVHSYTASSFFDRENTWSSSVGDDVEVGSASPLSISGGREEGR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0503 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lja6g0503 688 Gene3D - 22 279 - -
Lja6g0503 688 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246
Lja6g0503 688 Pfam Protein kinase domain 345 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0503 688 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Lja6g0503 688 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Lja6g0503 688 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0503 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 267 IPR013320 -
Lja6g0503 688 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0503 688 SUPERFAMILY Protein kinase-like (PK-like) 327 618 IPR011009 -
Lja6g0503 688 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Lja6g0503 688 CDD lectin_legume_LecRK_Arcelin_ConA 24 265 IPR001220 GO:0030246
Lja6g0503 688 MobiDBLite consensus disorder prediction 663 688 - -
Lja6g0503 688 CDD STKc_IRAK 351 617 - -
Lja6g0503 688 PANTHER - 2 684 - -
Lja6g0503 688 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 2 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0503 Lja-Chr6 12147233 12149807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0503 15 624 Receptor kinase-like Gene Family AT3G55550 60.650 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja6g0503 Lectin_legB 4.5e-76 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0503 - - gmx:100804136 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0503 6 12147233 12149807 Lja6g0503 6 12147233 12149807 ECH