Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja6g0492 | ATGGCTGGGATTTGCTGTGGTGTCGTCGGGGAGGGAGAGGCCGCTGCTGCGGCGACCTCTCGACCTTCCCGAAGACGGAGTTTAGACCTCCTCCCGGGGTTTAAATACCTCGCGGATGTCGCCCTCCCGCTTCCGGAAACTTCCCGGAAACACACAAGACTAGATCTCTGCGCCGCCCCGAGGGACGGCGAAGATGAATTCACCAGCGGCTCCTCCAAAAAGGTGAAGGAATCCAAGGGAAACAACGACGACGTCGTTTTGAAACCGAAACAGTCCACCGTTTCTTCTTCTTCAACGGAGGGGAATTTTGAAGCTGAAGAGTGTCCGAAATTCGGAGTCACTTCTGTCTGTGGCAGGAGAAGGGACATGGAAGATTCAGTCTCGGTTCGCCCTTCGTTCTCCGAGAGGGAAAACTTCCACTACTTCGGCGTTTTCGACGGGCACGGTTGCTCTCATGTTGCGACGATGTGCAAGGAGAGGCTTCACGAAATCGTGAAGGAAGAGGTTAATTTTGCGCCGGAGAATCTATCATGGAGAACCACGATGAAGCAAGGCTTCGCTCGCATGGACGATGAGGTTCAGAGATGGACGAGCCAGAGCAACGACACCACCATCACCTGCAGATGCGAGCTTCAAACCCCTCACTGCGACGCCGTCGGCTCCACCGCCGTCGTCGCCGTGGTCACGCCGGAGAAAATCATCGTCTCAAACTGCGGTGACTCCCGCGCTGTTCTCTGCCGTAAAGGCGTCGCCATCCCCCTCTCCGACGACCACAAGGTCCGTTTTCTTTTCCGTTTCATTTTCCCGAGAAACAAACACCACGTTTCTTCTCAATTTTCTTTTCTAACCGTTTTTCGGATCCGTTTCGTGCAGCCTGACCGACCCGATGAATTGATCCGGGTCCAAGCCGCTGGAGGGCGCGTGATCTATTGGGACGGACCGCGCGTGCTTGGGGTTCTAGCCATGTCAAGAGCCATAGGTGACAATTATCTGAAGCCTTACGTGATCTCCGAGCCGGAGGTAACGGTGACGGATCGGACGGACGAGGATGAGTGTTTGATACTAGCGAGTGATGGATTGTGGGATGTGGTGTCAAACGACACCGCATGTGGGGTGGTGAGGATGTGTCTCAAGGCGCAGAAGCAGCTGTCGCCGCCGGGATCACCCTATGAGGACGTGGCGGCCGACGGTTCGGACCGCGCGTGCTCCGATGCGTCCATTCTGTTGACCAAGTTGGCGCTGGCGAGGCATAGTTCGGATAACGTGAGTGTGGTGGTGGTTGATTTGAGGAGAGATCAAAGAAAATCATCCAATTCCAACATCAATGAATGA | 1332 | 0.5518 | MAGICCGVVGEGEAAAAATSRPSRRRSLDLLPGFKYLADVALPLPETSRKHTRLDLCAAPRDGEDEFTSGSSKKVKESKGNNDDVVLKPKQSTVSSSSTEGNFEAEECPKFGVTSVCGRRRDMEDSVSVRPSFSERENFHYFGVFDGHGCSHVATMCKERLHEIVKEEVNFAPENLSWRTTMKQGFARMDDEVQRWTSQSNDTTITCRCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRKGVAIPLSDDHKVRFLFRFIFPRNKHHVSSQFSFLTVFRIRFVQPDRPDELIRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRTDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKQLSPPGSPYEDVAADGSDRACSDASILLTKLALARHSSDNVSVVVVDLRRDQRKSSNSNINE* | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja6g0492 | 443 | Gene3D | - | 105 | 439 | IPR036457 | - | |
Lja6g0492 | 443 | PANTHER | ALPHABET, ISOFORM E-RELATED | 291 | 434 | - | - | |
Lja6g0492 | 443 | MobiDBLite | consensus disorder prediction | 62 | 84 | - | - | |
Lja6g0492 | 443 | ProSitePatterns | PPM-type phosphatase domain signature. | 141 | 149 | IPR000222 | GO:0043169 | |
Lja6g0492 | 443 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 22 | 259 | - | - | |
Lja6g0492 | 443 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 291 | 434 | - | - | |
Lja6g0492 | 443 | SMART | PP2C_4 | 98 | 427 | IPR001932 | - | |
Lja6g0492 | 443 | ProSiteProfiles | PPM-type phosphatase domain profile. | 110 | 429 | IPR001932 | - | |
Lja6g0492 | 443 | MobiDBLite | consensus disorder prediction | 85 | 101 | - | - | |
Lja6g0492 | 443 | MobiDBLite | consensus disorder prediction | 62 | 101 | - | - | |
Lja6g0492 | 443 | CDD | PP2Cc | 110 | 378 | IPR001932 | - | |
Lja6g0492 | 443 | PANTHER | ALPHABET, ISOFORM E-RELATED | 22 | 259 | - | - | |
Lja6g0492 | 443 | SUPERFAMILY | PP2C-like | 110 | 429 | IPR036457 | - | |
Lja6g0492 | 443 | Pfam | Protein phosphatase 2C | 111 | 260 | IPR001932 | - | |
Lja6g0492 | 443 | Pfam | Protein phosphatase 2C | 292 | 421 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja6g0492 | Lja-Chr6 | 11758898 | 11760953 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja6g0492 | 1 | 439 | PP2C-type Phosphatase Gene Family | AT3G11410 | 55.876 | 1.86e-139 | 403 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja6g0492 | K14497 | - | gmx:100776356 | 537.339 |