Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0487 ATGAATGGTATCATTCTCAATTGTCTTAATTTTTCTTGTTGTTTAAGAAAAATAAAGCACGCCTTTGCTACCTTGTCGTTTGTTGCTGAGACCTTCATCTTCCTTTATGTTGGGATGGATGCCCTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGCCCTGGAACATCTGTAGCAGTGAGTTCAGTATTGTTGGGTCTAATACTTCTTGGAAGAGCAGCTTTTGTTTTCCCTTTGTCCTTCTTATCCAACTTGGCTAAGAAATCGCAGAATGACAAAATCAGCTTCAGACAACAACGACTCCCCAATCTCCAAATCTGGTGGTGGTGGCAATTGTGGCGGGGTTCCTTCTCCCCTCACACTTTCTCTGCCATCTCCGATCCCTCTCCCTTTAGCTTCTCCTGCCCCTCTCTCCTCCAGCTTCCCCTTACAAATGTCGTATCCTTGATTAATTTTAAAATAGTGAATACATAA 474 0.4219 MNGIILNCLNFSCCLRKIKHAFATLSFVAETFIFLYVGMDALDIEKWKFVSDSPGTSVAVSSVLLGLILLGRAAFVFPLSFLSNLAKKSQNDKISFRQQRLPNLQIWWWWQLWRGSFSPHTFSAISDPSPFSFSCPSLLQLPLTNVVSLINFKIVNT* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0487 157 PANTHER SODIUM/HYDROGEN EXCHANGER 18 118 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lja6g0487 157 PANTHER SODIUM/HYDROGEN EXCHANGER 2 18 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0487 Lja-Chr6 11609095 11612106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0487 19 118 Antiporters AT3G05030 76.000 3.62e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0487 - - gmx:732573 146.362