Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0445 ATGTCTTATTCTTCTGCACTCACTATCCTCTCAAACTGCACAGTTTTCCCTGACCAAAAATCCACCATGGGAGATCTCAAGCTCTCTATCTCAGACCTTAACATGCTCTTAAGCCACTACATCCAAAAGGGTTGTCTCTTCACCACCCCACTAATCTCCTCCGACACTCTCATCACTCACCTCATCAATTCCCTCTCTAGCACCCTCTCCCTCTTCCCCCCACTCGCCGGCCGGTTTATTACCGACGCCGACGGTTACGTCTTCGTCTCATGCAACGACGCCGGAGCGGACTTCATCCACGCCTCCGCCGTTGATCTCACCGTCGCCGACCTCCTCTCCCCAATTGATGTCCCTCAGCACCTCTTCAAGCAACTCTTCCCCTTCCACCGCAAAATCAGCCACTCCGCCCATTCCTCCCCCGTCATGGCAATCCAGGTTACCGACCTCGCCGACGGAATCTTCATTGGTTGTGCCGTCAGCCACGCCGTCGTCGACGGCACCTCCTTGTGGAATTTCTTCAACACGTTCGCCGATGTTTCCCGGGGAGTCACCCGCGCCTCCAATATCCCGGACTTCCGCCGCGAATCCATGCTAATCTCCAAGGTTCCCCTCCGGCTGCCGGAAGGTGAACTCACGGTGACGTTCAACGCCGACGAGCCACTCCGGGAGAGGATCTTCAGCTTTAGCCGCCAAGCCATTCAGAACCTAAAGGCCGAAGTGAACAACCGCGAATCGTCGAGGGAAGCCGTTGAGTTGTCGGGGAAGCTGAGCAACGACGCGCAACATAAAACGGTTACGAGCAAGGAAGCAATTTCGAGAAACGTAACCTTCGAAACGACAGAGATTTCGTCATTTCAATCGTTATGCGCGCTGACGTGGAAGTGCGTGACGCGAGCGAGGTGTTTGGAGGGGTCGAAAACGACGACGTTTAGAATGGCGGTGAACATTAGGCACCGTTTGGATCCAAAGTTGAGTGATCGTTACTTCGGAAACGCGATTCAGAGCGTTGCCACGTGTTCTTCCGCGTGTGAGGTGGAGAGTAGGGATCTAAGGTGGATTGCGGAGCAGCTGAACAAAAGCGTGAAGGCGTATGATAGCGCTGTGGTGCGCCGCGCTGTGGAAAATTGGGAGCGTGAGCCGAAGTGCTTTGAGCTCGGGAATCACGATGGTGCGACTGTGCAAATGGGAAGCTCGCCGAGGTTTCCGATGTATGATAATGATTTTGGGTGGGGGAGGCCCTTGGCTGTTCGGAGCGGCGGAGCAAATAAGTTTGACGGGAAGATATCAGCGTTTCCGGGGAAGGATGGTGGCGGCGCTGTGGATTTGGAGATGGTTTTGGCGCCACAAACAATGGCACGACTCGAGTGTGATCCCGAGTTCATGCTTTACGTGTCTTCTTATCCACGACACGTATTAGAATCGTAA 1425 0.5439 MSYSSALTILSNCTVFPDQKSTMGDLKLSISDLNMLLSHYIQKGCLFTTPLISSDTLITHLINSLSSTLSLFPPLAGRFITDADGYVFVSCNDAGADFIHASAVDLTVADLLSPIDVPQHLFKQLFPFHRKISHSAHSSPVMAIQVTDLADGIFIGCAVSHAVVDGTSLWNFFNTFADVSRGVTRASNIPDFRRESMLISKVPLRLPEGELTVTFNADEPLRERIFSFSRQAIQNLKAEVNNRESSREAVELSGKLSNDAQHKTVTSKEAISRNVTFETTEISSFQSLCALTWKCVTRARCLEGSKTTTFRMAVNIRHRLDPKLSDRYFGNAIQSVATCSSACEVESRDLRWIAEQLNKSVKAYDSAVVRRAVENWEREPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGKDGGGAVDLEMVLAPQTMARLECDPEFMLYVSSYPRHVLES* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0445 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 465 - -
Lja6g0445 474 Gene3D - 7 203 IPR023213 -
Lja6g0445 474 Gene3D - 208 456 IPR023213 -
Lja6g0445 474 SUPERFAMILY CoA-dependent acyltransferases 27 184 - -
Lja6g0445 474 Pfam Transferase family 7 461 - -
Lja6g0445 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0445 Lja-Chr6 10781620 10783179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0445 31 455 Monolignol Biosynthesis Gene Families AT5G48930 27.790 1.82e-38 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0445 6 10781620 10783179 Lja6g0445 6 10781620 10783179 ECH
Lja6g0445 6 10781620 10783179 Lja6g0445 6 10781620 10783179 PCT