Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0442 ATGGCTTTCATAAACTTTGCCCTTCTCACGCTCTGCATTTCGCTTATTCTTTCCATCTTGGCATCATCATCCATAGCTTCCAACCCACCTATAGTTCCCCCAGAAACTATTTGCAGATCCACTACAGATCCTTCCTTCTGTAAAACAGTGCTTGCAAACAAAAACGGCACCGTCTTTGACTATGGCCGCATTGCTGTCACAAAGTCCTTATCCCAATCCCGCAAGTTCTTAAACTTAGTGGATTCACACCTTCAAGATAAATCATCTTTGTCCCAACCCACAATTTCTTCTCTTGAAGATTGTCTTTTTCTTGCTGAACTAAACTTTGAATACTTATCAAACACTATTAACACCGCTAATAAATCTAGTGATGTTCTTCCCTCTTCCCAAGCAGAAGAAATACACACGTTACTAAGTGCTGTTCTCACAAACCAACAAACTTGCTTAGATGGCCTAGAGACCACGGCTTCTGATCAGAGAGTGAAGAATTATTTATCATCCTCGCTTTCTAATGATACAAAGCTTCATGGTGTCTCACTTGCCCTCTTTGTGAAGGGCTGGGTGCCTGAGAAGAAAATACAAACATCATGGCAATTTAATGGGAGACACTTGGGTTTTCGGAACGGTCGCTTACCATTGAAGATGTCAAATCGAGCACGTGCCATTTATGATTCTGCGGTCTCTAGAGGCCGCGGGAGAAAACTGCTTCAAGCGTCGGGTGACAACCTAAGCGTCACAGTGAGTGACATCGTGGTTGTTAGTCAGGATGGAAGTGGAAATTTCACCGCTATCAACGATGCTATAGCTGCTGCACCAAATAACACAAATGGTAGTGGTGGCTACTTTCTTATATTTGTCACCGAGGGTGTGTATCAAGAATATGTGTCTATACCAAAAAACAAGAAGTACTTGATGATGGCAGGAGATGGGATCAATCGAACAATTATCACCGGTGATCATAATGTTGTGGATAATTTTACCACATTCAACTCTGCAACATTTGCTGTTGTAGCGCAAGGGTTTGTAGCAGTCAACATAACATTCCGAAACACAGCTGGGCCAAGCAAGCACCAAGCAGTTGCTGTAAGAAATGGAGCTGATCTGTCCACCTTCTACAGCTGCAGCTTTGAAGGGTATCAAGACACTCTGTACACACACTCTTTGAGGCAATTTTACCGTGAATGTGACATCTATGGCACAGTTGATTTCATATTTGGAAATGCCGCTGTTGTTTTCCAAACTTGCAACATCTATCCACGCCTCCCCATGAGTGGACAATTCAATGCCATTACTGCTCAAGGTCGAACTGATCCAAATCAAAACACGGGAAGTTCCATACATAATGCCACTATTAAAGCTACTGAAGATTTGGCTCCGAAGGTTAGTACAGTGAAAACATACCTTGGGAGGCCATGGAAAGAGTACTCAAGGACTGTGTATTTGCAATCATTCATGGATAACTTGATAGATCCCACTGGTTGGCATGAATGGAGCGGAGATTTTGCATTAAGTACCTTGTACTATGCAGAGTATAATAACACGGGACCTGGTTCAAACACTGTGAATAGAGTGAATTGGCTAGGCTATCATGTTATTAATGCTACTGATGCAGCTAATTTTACTGTGTCTAACTTCTTAGATGGGGATAATTGGCTGCCTCAGACTGGTGTCCCATACTTGAGTGGATTGATATAG 1695 0.4248 MAFINFALLTLCISLILSILASSSIASNPPIVPPETICRSTTDPSFCKTVLANKNGTVFDYGRIAVTKSLSQSRKFLNLVDSHLQDKSSLSQPTISSLEDCLFLAELNFEYLSNTINTANKSSDVLPSSQAEEIHTLLSAVLTNQQTCLDGLETTASDQRVKNYLSSSLSNDTKLHGVSLALFVKGWVPEKKIQTSWQFNGRHLGFRNGRLPLKMSNRARAIYDSAVSRGRGRKLLQASGDNLSVTVSDIVVVSQDGSGNFTAINDAIAAAPNNTNGSGGYFLIFVTEGVYQEYVSIPKNKKYLMMAGDGINRTIITGDHNVVDNFTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQTCNIYPRLPMSGQFNAITAQGRTDPNQNTGSSIHNATIKATEDLAPKVSTVKTYLGRPWKEYSRTVYLQSFMDNLIDPTGWHEWSGDFALSTLYYAEYNNTGPGSNTVNRVNWLGYHVINATDAANFTVSNFLDGDNWLPQTGVPYLSGLI* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0442 564 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Lja6g0442 564 CDD PMEI-like_3 36 183 - -
Lja6g0442 564 Gene3D - 248 564 IPR012334 -
Lja6g0442 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 185 IPR035513 -
Lja6g0442 564 PANTHER PECTINESTERASE 23 562 - -
Lja6g0442 564 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Lja6g0442 564 SMART PMEI_2 29 182 IPR006501 GO:0004857
Lja6g0442 564 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Lja6g0442 564 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 23 562 - -
Lja6g0442 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 183 IPR035513 -
Lja6g0442 564 SUPERFAMILY Pectin lyase-like 246 562 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0442 Lja-Chr6 10743399 10747207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0442 1 564 Carbohydrate Esterase AT4G02330 60.585 0.0 690