LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g0425	ATGGCATCTTTGCCAACACTCATCTTCTTACTCACCACCATCTCCACCGTCTTTCTCCTCCTCCTCCGCAAATCTCGCTACCGTCGCCTCCGCCTACCACCGGGTAGCCTCGGCTTCCCGTTGATCGGCGAGACGCTACAACTAATATCAGCCTACAAGAGCGAGAATCCAGAACCATTCATCGACCGTAGAGTGAACCGGTACGGTCCAATTTTCACGACCCACGTATTCGGCGAGCCGACAGTGTTCTCGGCCGACCCGGTGACGAACCGGTTCATTTTGCAGAACGAAGGGAGGCTCTTTGAGTCCAGCTACCCTGGTTCGATATCGAACCTGCTCGGGAAGCACTCGCTGTTGCTTATGAAAGGTGGGCTCCACAAGAGAATGCACTCCCTCACGATGAGCTTCACTAATTCCTCAATTATTAAGAACCATCTTCTCCTTGACATAGACCGGCTCATCCGGCTCAACTTGGATGCTTGGTCTGACCGGGTTCTTCTCATGGAGGAGGCCAAGAAGATAACATTTGAGCTGACAGTGAAGCAGTTGATGAGCTTTGATCCAGATGAATGGACAGAGAGTTTAAGGAAAGAGTACGTTCTTGTGATTGAAGGATTCTTCACACTCCCCTTTCCTCTATTCTCCACCACCTACCGCAGAGCCATCAAGGCAAGAACTAAGGTGGCAGAGGCACTAAGTGAGATAGTGAGGAAGAGGAGAAAAGAGAGTGAAAGCAAGAATGACATGCTTGGGGCACTGTTGGCCTCCGGCGACCACTTCCCCAATGAGGAAATAGTGGATTTCATGTTGGCTATGCTCGTCGCCGGTTATGAGACCACCTCCACCATAATGACTCTTGCAGTCAAGTTCCTCACTGAGACTCCTCAAGCCATGGCACAGCTCAAGGAAGAACATGACCAAATCAGAGCAAGGAGTGACCCCGAGGCAGCACTAGAATGGGCAGATTACAAGTCAATGGCATTTACTCAATGCGTCGTGAATGAGACCTTAAGAGTGGCAAACATAATTAGTGGGGTATTTAGGAGAGCCATGACAGACATTGACATCAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTCCGTGCTGTACATTTGAACCCTGAACATTTCAAAGATGCCCGCACCTTCAATCCATGGAGATGGCAGAATAACTCAGAAGCAGCAAGCCCGGGGAATGTATACACACCTTTTGGAGGAGGGCCACGGTTGTGTCCTGGTTATGAGCTTGCCAGAGTTGTGCTTTCTATCTTCCTTCACCGCTTCGTCACCCGCTTCAGTTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACCACAAGGACACAGAAGAGGTATCCTATTTTAGTGAAGCGTAGAGAGGAGTCCAGACAATGTATATATGAGAAATGA	1428	0.4923	MASLPTLIFLLTTISTVFLLLLRKSRYRRLRLPPGSLGFPLIGETLQLISAYKSENPEPFIDRRVNRYGPIFTTHVFGEPTVFSADPVTNRFILQNEGRLFESSYPGSISNLLGKHSLLLMKGGLHKRMHSLTMSFTNSSIIKNHLLLDIDRLIRLNLDAWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARTKVAEALSEIVRKRRKESESKNDMLGALLASGDHFPNEEIVDFMLAMLVAGYETTSTIMTLAVKFLTETPQAMAQLKEEHDQIRARSDPEAALEWADYKSMAFTQCVVNETLRVANIISGVFRRAMTDIDIKGYTIPKGWKVFASFRAVHLNPEHFKDARTFNPWRWQNNSEAASPGNVYTPFGGGPRLCPGYELARVVLSIFLHRFVTRFSWVPAEEDKLVFFPTTRTQKRYPILVKRREESRQCIYEK*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja6g0425	475	Pfam	Cytochrome P450	33	446	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	408	417	IPR017972	GO:0005506\|GO:0016705
	Lja6g0425	475	PRINTS	P450 superfamily signature	275	292	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	P450 superfamily signature	331	342	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	P450 superfamily signature	406	415	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	P450 superfamily signature	415	426	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PANTHER	CYTOCHROME P450 90A1	9	463	-	-
	Lja6g0425	475	SUPERFAMILY	Cytochrome P450	26	465	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	Gene3D	Cytochrome P450	22	465	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	370	394	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	65	84	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	264	281	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	330	348	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	284	310	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	415	438	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PRINTS	E-class P450 group I signature	405	415	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja6g0425	475	PANTHER	CYTOCHROME P450 26	9	463	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja6g0425	Lja-Chr6	10333829	10342467	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja6g0425	121	466	Cytochrome P450	AT5G05690	78.571	0.0	576

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g0425	K09588		-	gmx:100775886	787.719

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja6g0425	6	10333829	10342467	Lja6g0425	6	10333829	10342467	ECH
	Lja6g0425	6	10333829	10342467	Lja6g0425	6	10333829	10342467	PCT